Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq103 107 2e-18 >seq103 Length=904190 Score = 107 bits (118), Expect = 2e-18 Identities = 409/634 (65%), Gaps = 15/634 (2%) Strand=Plus/Plus Query 132877 AAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGT 132936 ||||| ||||| || || ||||| || || || || ||||| | | || | | Sbjct 561644 AAATGAGAGAACAATAAACACGCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAAT 561703 Query 132937 TCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCG 132996 ||||| ||| || || || ||||| | || | || || | ||| || |||| ||| Sbjct 561704 TCGTTAGAGAAGGTTAAACCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCA 561763 Query 132997 AAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAAC 133056 || || ||||||| || ||||| || |||||||| || | | || || || Sbjct 561764 AACGAACCACTGAAGAAGATACCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAAT 561823 Query 133057 GTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC 133116 || || | | | |||||| | | ||||| |||||||| | |||| || || Sbjct 561824 AAAGCGTCGTCGTCGTTGATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGA 561883 Query 133117 ATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGA-GGAACGC--ACGTAGGTG 133173 || | ||||| || || || || || | ||||| ||| | | ||| ||| Sbjct 561884 ATGTTATCGATAGCATTAAATAA---GAAATCGGCTTCCTTTGGATCTTTGATGTAAGTG 561940 Query 133174 TCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAA 133233 ||||| || ||| || | || ||||| | ||| ||||| |||||| || || || Sbjct 561941 TCGATAAGTAACGAGTAAGTCTCAGAGTGAATGTTTTCCATCATGATTTGGAAACCATAG 562000 Query 133234 AAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTG 133293 || ||| || || || ||||| || |||| || |||| ||||||||| Sbjct 562001 AAACACTTGGCTTCTGGGGTTTGGACTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTG 562060 Query 133294 ACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG--ATGAAATGGCGCTCGT 133351 || || ||||| || || ||||| |||| | | || | ||||| | | || | Sbjct 562061 ACAATACCGTCAGAAGCAGCAAAAAACGCCA--AGATTCTGGAAATGAAGTATCTTTCAT 562118 Query 133352 TGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 ||| |||||| || |||||| | || ||||| || ||| | || ||| ||| Sbjct 562119 TGTTGTTCAATTTTTCGTTCCAGTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGG 562178 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATA-TTGTATGGGA 133467 |||| || ||||| |||||||| |||||||| ||| || || || ||| ||||| Sbjct 562179 TCCAGAAGGACGCTTCGGCTTTCTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGA 562238 Query 133468 AAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 | || || || || || | |||||| ||||| Sbjct 562239 ACAA-AACGAAACGACGCGTGTTTTCCATCAACA 562271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171593333120