Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq103 199 5e-46 >seq103 Length=904190 Score = 199 bits (220), Expect = 5e-46 Identities = 1112/1759 (63%), Gaps = 57/1759 (3%) Strand=Plus/Plus Query 109413 ATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTT 109472 ||| ||||||||||| || | ||| |||||| | || | |||||| || | | || Sbjct 447829 ATAGTACATACCCGTCTTTAAACCCTTCTTCCAACCATAGAAATGCATCGAGGTCAACTT 447888 Query 109473 GGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACC 109532 | ||| || || || | || | ||| || || ||||| |||||| | Sbjct 447889 ACCCATTGTTGGGTCCTTAATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGC 447948 Query 109533 ACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAA 109592 | |||||| ||||| ||||| ||| |||||| ||||||||| || ||||| || || Sbjct 447949 TCTATCAGCAGCCATATCGATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAA 448008 Query 109593 ATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTC---AC 109649 || | ||||||||||||| | | |||||||||| ||| || | Sbjct 448009 GGCTTTCAATTCATCGGGAATGTTAGGTAAGGTTTGAATAGA---ACCGTTGTTGGAGAT 448065 Query 109650 CATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC--GTCAACAAG- 109706 ||| | |||||| || | ||||| ||| | | | ||| || || ||| Sbjct 448066 AATGTTGTTCTTCATATCATCGTTCCAGATACCTAAATCCACCAAATCACGT-AATAAGT 448124 Query 109707 ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGT 109766 ||| |||||| | |||||||||||| | | || ||| || || | || Sbjct 448125 ATGG--GTTGACAATTTGAAATTCACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGT 448182 Query 109767 GTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGG 109826 ||| ||||||||||| |||||||| |||| ||||| | ||||||||| || ||||| || Sbjct 448183 GTATGGTTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGG 448242 Query 109827 AGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCC 109885 ||| | | | ||| ||||| || ||| || ||| || | | |||| || Sbjct 448243 AGCAACTAATAAGGA-GTTTCTGATACC----GTGTTTGGCC----AAGTTTTGCTTCAA 448293 Query 109886 AATCATAACGACCACTAAATTTAGT---CTCACCATCCCACATATCTGGTTGAAGTACAC 109942 | | || | | | |||| ||| || | ||||||| || ||| | |||| Sbjct 448294 AGT-ATCCCAGTCCCATAATTCAGTTGGCTTTCTTTCCCACAAGTCAAATTGTAAGACAC 448352 Query 109943 CCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGG 110002 ||| || || |||||||| | | | | ||||| || || | || ||||| || Sbjct 448353 CCTTAGATGCTGGAGAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGCCAATTCAA 448412 Query 110003 ATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAG 110062 || || || | || | || || || || |||||||| || | || | || Sbjct 448413 TGGATGCTTCCACAGCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAATTCTTTAG 448472 Query 110063 ACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGCTAGACCCTGAACA 110121 |||| | |||| || || | | | ||| | ||||| |||| |||| ||| |||||| Sbjct 448473 CTTCTTGAGAGTCAAATGGTA-ATCTCAATGCCATAAAAGCATCGGCTAAACCTTGAACA 448531 Query 110122 CCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAA 110178 || | |||| || | | ||||||| ||| | ||| |||| || ||||| Sbjct 448532 CCTAAGGCAATTGGTCTGTTTCTCATGTTCGAGTTCCTAGC---TTCTGGAACTGGGTAG 448588 Query 110179 AAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGT 110238 |||| |||||||| | | ||| | || ||||||| ||| || | |||||| | Sbjct 448589 TAGTTACGGTCGATAATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCATGTAAC 448648 Query 110239 TTGTCGTAATCGAAC--------GTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAA 110290 || ||| ||||| || | | ||||| || ||| || || | |||| Sbjct 448649 TTTTCGAAATCGTACCAACTGGAGGTACTGTCTCTTTCA--ACAAATGATGGTAAGGCAA 448706 Query 110291 TAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTAC 110350 |||| || | || || |||| | || || | | |||||| | ||| || || Sbjct 448707 TAGAAGCCAAGTTACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCTCACAAC 448766 Query 110351 ACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCAT 110410 ||||||| || || |||| ||| |||||||| ||||| | || ||| || |||| Sbjct 448767 ACAAGTTAGATGATTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCAT 448826 Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470 ||||||| | ||| |||| ||||| ||||| || |||| | | || || | ||||| Sbjct 448827 CCTTATATAACATAAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGTACCATA 448886 Query 110471 CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGT 110530 | || | | | || | | ||| | ||||| |||| ||| || | Sbjct 448887 ATTTTTGAGCCTTAATAACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGTATAATT 448946 Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGG 110590 | || ||||| | || || ||||| || | ||| || | || ||| |||| | | Sbjct 448947 CTTCGAATTCATCACCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGAATAATG 449006 Query 110591 ACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGA 110650 ||| | || | ||||| ||||||||||| | ||||||||||| | |||| || Sbjct 449007 TCCAGTCACCGTTTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGGCCGGGA 449066 Query 110651 AAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCA 110710 | | || | | | ||||| | || || || | | || | ||||| | Sbjct 449067 ATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGA 449126 Query 110711 TGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGAC 110764 ||||||| ||||| ||||| | || | ||| | || || ||| || || Sbjct 449127 ATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGTTACCAC 449186 Query 110765 CCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCAT 110824 | || | ||||| || || ||| || || || | | ||| ||||| || |||| Sbjct 449187 CT---TGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCAT 449243 Query 110825 CGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATATGC 110883 || ||| || ||||| || | | || | ||| |||||||| ||| || || Sbjct 449244 TAGAAGTACCGTTGGTACCGGCGATGTAAGTACC-AGTGGAACGAATGTTGTGAATGTGT 449302 Query 110884 ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAAT 110942 | |||||| ||||| || | ||| ||| |||||| ||| || || | || || Sbjct 449303 AAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAG-GTGTCGTAGAT 449361 Query 110943 ACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGG 111002 ||| ||||| || || |||| | |||| || || ||||||||||| || || | ||| Sbjct 449362 ACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGG 449421 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTT 111062 || || ||||| || | || || | | || |||| | |||||||||| |||| Sbjct 449422 GGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTT 449481 Query 111063 GTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAA 111122 ||| | |||| | | ||| | |||||| ||||||| ||||||| ||| | Sbjct 449482 GTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAAT 449541 Query 111123 CATATATTGAGGCGTTTCG 111141 || || ||| || ||||| Sbjct 449542 CAAATGTTGTGGTCTTTCG 449560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974579095400