Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq103 224 1e-53 seq102 86.0 7e-12 >seq103 Length=904190 Score = 224 bits (248), Expect = 1e-53 Identities = 924/1444 (64%), Gaps = 35/1444 (2%) Strand=Plus/Plus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGG 105953 ||||||||| ||| || || || | |||||| ||| || || || | ||||| | Sbjct 448129 GTTGACAATTTGAAATTCACCAGCCAAAACTCTTCT-AGAGTAAATATTTGAAGTGTATG 448187 Query 105954 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 106013 |||| || |||||||| || || || ||||| | ||||| || |||||||| || || | Sbjct 448188 GTTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAA 448247 Query 106014 TCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG- 106072 || | ||| | | ||| | || | | || ||| | | ||||||||| Sbjct 448248 CTAATAAGGAGTTTCTGATACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCC 448307 Query 106073 -TAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGG 106131 || || || | | |||| |||||||| |||||||| | || || | || | || Sbjct 448308 ATAATTCAGTTGGCTTTCT--TTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGG 448365 Query 106132 AGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAG 106191 |||||| ||| |||| | || | |||| | ||||||||||||| | || |||| Sbjct 448366 AGAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCAC 448425 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 | |||| || ||||||||||| || | | || | || || ||||| | || || Sbjct 448426 AGCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTC 448485 Query 106252 AAATGCGTAGCGGCACAA---AATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 106308 ||||| ||| | ||| ||||| |||| || | |||||||||||| || |||| Sbjct 448486 AAATG-GTA--ATCTCAATGCCATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAAT 448542 Query 106309 AGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAA 106367 ||||||| || ||| || || || | || ||| ||| || || | || | ||| | Sbjct 448543 TGGTCTGTTTCTCATGTTCGAGTTCCTAGC-TTCTGGAACTGGGTAGTAGTTACGGTCGA 448601 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT--- 106424 | | || |||| || || |||| ||| || | |||||| | ||||| ||| Sbjct 448602 TAATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCATGTAACTTTTCGAAATCGT 448661 Query 106425 --CAA----AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 106478 ||| | || | ||||||| | ||| | ||| | ||| || || ||||| | Sbjct 448662 ACCAACTGGAGGTAC-TGTCTCTT--TCAACAAATGATGGTAAGGCAATAGAAGCCAAGT 448718 Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538 | |||||||| ||||| | | ||| || | ||| || ||||||||| || Sbjct 448719 TACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCTCACAACACAAGTTAGATG 448778 Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598 || || | || || |||||||| || |||| ||||| || |||||||| || | || Sbjct 448779 ATTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCATCCTTATATAACA 448838 Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTG 106658 | | || || || || || || |||| | | || || | ||| | | || Sbjct 448839 TAAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCT 448898 Query 106659 GTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 106718 | || | | | || || ||||| || | ||| | |||| || || | Sbjct 448899 TAATAACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCAT 448958 Query 106719 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 106778 |||| | || || | |||||| || | || |||| |||| | | ||| | ||| Sbjct 448959 CACCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGT 449018 Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 106838 | ||||| | ||||||||| | || |||||||| | || | || | ||||||| Sbjct 449019 TTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAG 449078 Query 106839 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 106898 | | ||||| | || || || || | || | ||| || | |||||||| | Sbjct 449079 CTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGAATATATCCGCAT 449138 Query 106899 GCCATGGCTC------AAGATAGACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTA 106952 |||| || || |||| | || || || ||| | ||| |||||| | Sbjct 449139 GCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCTTGATCCA 449195 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 |||| || || ||| |||||| || |||| ||||||||| ||||||| || ||| | Sbjct 449196 CATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCATTAGAAGTACCGT 449255 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 | || || || || | ||| | | | || ||||| | ||||| || | Sbjct 449256 TGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGTAAACCAATGCCAC 449315 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 | || | ||| || || |||||| | | | || | |||||||||| || |||| Sbjct 449316 CTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGT 449375 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192 | ||||| | || | | ||| ||| ||||| || || || || ||||||||||| | Sbjct 449376 CATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAA 449435 Query 107193 AGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGA 107252 | | |||||| | |||| |||| | |||||||||| ||| ||| | || | || Sbjct 449436 ATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTTGTACGATTCGACGA 449495 Query 107253 CAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTG 107312 | || || || || ||||| || || | || || | ||||| || | ||| ||| Sbjct 449496 CTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAATCAAATGTTGTGGTC 449555 Query 107313 TTTC 107316 |||| Sbjct 449556 TTTC 449559 >seq102 Length=776775 Score = 86.0 bits (94), Expect = 7e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 9357 CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 9416 ||||| || || | |||||||||||||| | ||| ||||| |||| ||| || ||| Sbjct 654587 CGTTGTTTACCAATTGCATCAATCTCATCGACGAATACAATTGATGGAGAATTCTCACGG 654528 Query 9417 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAG 9476 || | | ||| | ||| ||||| | || || |||||||||||||| || || || Sbjct 654527 GCAGTCTTAAACAAATCACGAACACGAGATGCACCAACACCAACAAACATTTCAACGAAT 654468 Query 9477 TTTGCGGC-GGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAG 9535 | | | | |||| | | ||| || ||| | | |||||| ||| | || ||| | Sbjct 654467 TCAGAACCTGAAACAGAGTA-GAATGGAACACTGGCTTCACCTGCAGTTGCCTTGGCTAT 654409 Query 9536 AAGAGTCTTACCCGTACCTGG 9556 ||| |||||||| |||||||| Sbjct 654408 AAGCGTCTTACCAGTACCTGG 654388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979376671320