Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq141 116 4e-21
>seq141
Length=295507
Score = 116 bits (128), Expect = 4e-21
Identities = 190/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
|| ||||| |||||| | |||||||||||| ||||| | || || || ||||| |||
Sbjct 293667 GACATTGCATTAGGTACTTCACAAAGGTTTGGTGTTCCTTTCGGTTACGGTGGTCCACAT 293608
Query 153807 GCTGCATTCTTTGCAA-CAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865
|| ||||| || |||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 293607 GCAGCATTTTTCGCAACCAACA-TGAAATACTCCCGTAAGATTCCTGGTAGAATTGTTGG 293549
Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925
| ||| ||||| ||| || ||||| ||||| ||| |||| || ||||||||
Sbjct 293548 TTTATCAAAGGATAGATTAGGCAAGCCAGCATTGAGATTGGCATTACAAACGAGAGAGCA 293489
Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985
||||| | | | || || || || ||| || || || ||||| || | |||||||
Sbjct 293488 ACATATTAAGCGTGAAAAGGCTACATCTAATATTTGTACTGCTCAAGCTTTATTGGCTAA 293429
Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGT 154016
||| ||| | || || | || ||||||
Sbjct 293428 CATGGCTGCGATGTACGCGGTTTACCATGGT 293398
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264
|||| ||| | || ||| ||||||| |||||||| || || ||||| || |||
Sbjct 294224 TTATTGGTAAGGGTTACGCCGGAACCAAGGTTCCCCCAGTGATCCAAAGAAAC-TTATTG 294166
Query 153265 AGAATC-CTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 153322
||||| | || |||||||| ||||| || || || ||| | || || || || || ||
Sbjct 294165 -GAATCGCCAGAATGGTACACCTCTTATACACCATACCAACCAGAAATCTCACAAGGTAG 294107
Query 153323 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGC 153382
|||||| | ||||| ||||||||||| | | || | || || ||| || ||
Sbjct 294106 ATTGGAGTCGTTATTGAATTACCAAACCATGGTTACCTCGTTGACTGGTTTAAACATGGC 294047
Query 153383 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
||| || || |||| ||||||| ||||| || | |||||||||
Sbjct 294046 AAATGCTTCGTTATTGGATGAAGGTACTGCTGCGGGTGAAGCAATG 294001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211402649120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |