Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq141 116 4e-21 >seq141 Length=295507 Score = 116 bits (128), Expect = 4e-21 Identities = 190/271 (70%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 || ||||| |||||| | |||||||||||| ||||| | || || || ||||| ||| Sbjct 293667 GACATTGCATTAGGTACTTCACAAAGGTTTGGTGTTCCTTTCGGTTACGGTGGTCCACAT 293608 Query 153807 GCTGCATTCTTTGCAA-CAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 || ||||| || |||| ||||| || || | ||||| ||||| |||||||| || Sbjct 293607 GCAGCATTTTTCGCAACCAACA-TGAAATACTCCCGTAAGATTCCTGGTAGAATTGTTGG 293549 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925 | ||| ||||| ||| || ||||| ||||| ||| |||| || |||||||| Sbjct 293548 TTTATCAAAGGATAGATTAGGCAAGCCAGCATTGAGATTGGCATTACAAACGAGAGAGCA 293489 Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985 ||||| | | | || || || || ||| || || || ||||| || | ||||||| Sbjct 293488 ACATATTAAGCGTGAAAAGGCTACATCTAATATTTGTACTGCTCAAGCTTTATTGGCTAA 293429 Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGT 154016 ||| ||| | || || | || |||||| Sbjct 293428 CATGGCTGCGATGTACGCGGTTTACCATGGT 293398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264 |||| ||| | || ||| ||||||| |||||||| || || ||||| || ||| Sbjct 294224 TTATTGGTAAGGGTTACGCCGGAACCAAGGTTCCCCCAGTGATCCAAAGAAAC-TTATTG 294166 Query 153265 AGAATC-CTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 153322 ||||| | || |||||||| ||||| || || || ||| | || || || || || || Sbjct 294165 -GAATCGCCAGAATGGTACACCTCTTATACACCATACCAACCAGAAATCTCACAAGGTAG 294107 Query 153323 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGC 153382 |||||| | ||||| ||||||||||| | | || | || || ||| || || Sbjct 294106 ATTGGAGTCGTTATTGAATTACCAAACCATGGTTACCTCGTTGACTGGTTTAAACATGGC 294047 Query 153383 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| || || |||| ||||||| ||||| || | ||||||||| Sbjct 294046 AAATGCTTCGTTATTGGATGAAGGTACTGCTGCGGGTGAAGCAATG 294001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211402649120