Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq141 125 8e-24 >seq141 Length=295507 Score = 125 bits (138), Expect = 8e-24 Identities = 192/271 (71%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 |||||||| |||||| | |||||||||||| ||||| | || ||||| ||||| ||| Sbjct 293667 GACATTGCATTAGGTACTTCACAAAGGTTTGGTGTTCCTTTCGGTTACGGTGGTCCACAT 293608 Query 158482 GCTGCATTCTTTGCAA-CAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 || ||||| || |||| ||||| || || | ||||| ||||| |||||||| || Sbjct 293607 GCAGCATTTTTCGCAACCAACA-TGAAATACTCCCGTAAGATTCCTGGTAGAATTGTTGG 293549 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | ||| ||||| ||| || ||||| ||||| ||| |||| || |||||||| Sbjct 293548 TTTATCAAAGGATAGATTAGGCAAGCCAGCATTGAGATTGGCATTACAAACGAGAGAGCA 293489 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 ||||| | | || || || || ||| || || || || ||||| | ||||||| Sbjct 293488 ACATATTAAGCGTGAAAAGGCTACATCTAATATTTGTACTGCTCAAGCTTTATTGGCTAA 293429 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGT 158691 ||| ||| | | || || | || |||||| Sbjct 293428 CATGGCTGCGATGTACGCGGTTTACCATGGT 293398 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| ||| | || ||| ||||||| |||||||| || || ||||| || ||| Sbjct 294224 TTATTGGTAAGGGTTACGCCGGAACCAAGGTTCCCCCAGTGATCCAAAGAAAC-TTATTG 294166 Query 157940 AGAATC-CTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 157997 ||||| | || |||||||| ||||| || || || ||| | || || || || || || Sbjct 294165 -GAATCGCCAGAATGGTACACCTCTTATACACCATACCAACCAGAAATCTCACAAGGTAG 294107 Query 157998 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGC 158057 |||||| | ||||| ||||||||||| | | || | || || || || || Sbjct 294106 ATTGGAGTCGTTATTGAATTACCAAACCATGGTTACCTCGTTGACTGGTTTAAACATGGC 294047 Query 158058 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||| || || |||| ||||||| ||||| || | ||||||||| Sbjct 294046 AAATGCTTCGTTATTGGATGAAGGTACTGCTGCGGGTGAAGCAATG 294001 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 159544 TGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC-AGACAGAT 159602 ||||||||||| ||||| ||||| ||| | ||| |||||||| || ||| |||| Sbjct 292515 TGTATTATGATCACATACCCATCGACATACGGTTTATTTGAACCAGGTATCAAGACTTCC 292456 Query 159603 ATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGC 159662 || | || || || | || |||||| || || | |||||||| || | || || Sbjct 292455 AT-CGACATGGTCCACAACAACGGTGGTTTAGTTTACTTGGATGGTGCTAACATGAACGC 292397 Query 159663 ACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACA 159722 || || ||| || || ||| |||| | ||||| ||||| ||||| | ||| | || Sbjct 292396 CCAAGTTGGTTTAACATCTCCAGGTGATTTAGGTGCCGATGTCTGTCACTTGAACATCCA 292337 Query 159723 TAAGACATTCTGTATT-CCACATGGAGGTGGAGGTCCTGG 159761 ||||| || || ||| | ||||| ||||| ||||| || Sbjct 292336 CAAGACCTT-TGCATTATCCCATGGTGGTGGTGGTCCAGG 292298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049781326480