Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq141 125 8e-24
>seq141
Length=295507
Score = 125 bits (138), Expect = 8e-24
Identities = 192/271 (71%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481
|||||||| |||||| | |||||||||||| ||||| | || ||||| ||||| |||
Sbjct 293667 GACATTGCATTAGGTACTTCACAAAGGTTTGGTGTTCCTTTCGGTTACGGTGGTCCACAT 293608
Query 158482 GCTGCATTCTTTGCAA-CAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540
|| ||||| || |||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 293607 GCAGCATTTTTCGCAACCAACA-TGAAATACTCCCGTAAGATTCCTGGTAGAATTGTTGG 293549
Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600
| ||| ||||| ||| || ||||| ||||| ||| |||| || ||||||||
Sbjct 293548 TTTATCAAAGGATAGATTAGGCAAGCCAGCATTGAGATTGGCATTACAAACGAGAGAGCA 293489
Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660
||||| | | || || || || ||| || || || || ||||| | |||||||
Sbjct 293488 ACATATTAAGCGTGAAAAGGCTACATCTAATATTTGTACTGCTCAAGCTTTATTGGCTAA 293429
Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGT 158691
||| ||| | | || || | || ||||||
Sbjct 293428 CATGGCTGCGATGTACGCGGTTTACCATGGT 293398
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939
|||| ||| | || ||| ||||||| |||||||| || || ||||| || |||
Sbjct 294224 TTATTGGTAAGGGTTACGCCGGAACCAAGGTTCCCCCAGTGATCCAAAGAAAC-TTATTG 294166
Query 157940 AGAATC-CTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 157997
||||| | || |||||||| ||||| || || || ||| | || || || || || ||
Sbjct 294165 -GAATCGCCAGAATGGTACACCTCTTATACACCATACCAACCAGAAATCTCACAAGGTAG 294107
Query 157998 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGC 158057
|||||| | ||||| ||||||||||| | | || | || || || || ||
Sbjct 294106 ATTGGAGTCGTTATTGAATTACCAAACCATGGTTACCTCGTTGACTGGTTTAAACATGGC 294047
Query 158058 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
||| || || |||| ||||||| ||||| || | |||||||||
Sbjct 294046 AAATGCTTCGTTATTGGATGAAGGTACTGCTGCGGGTGAAGCAATG 294001
Score = 86.0 bits (94), Expect = 7e-12
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 159544 TGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC-AGACAGAT 159602
||||||||||| ||||| ||||| ||| | ||| |||||||| || ||| ||||
Sbjct 292515 TGTATTATGATCACATACCCATCGACATACGGTTTATTTGAACCAGGTATCAAGACTTCC 292456
Query 159603 ATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGC 159662
|| | || || || | || |||||| || || | |||||||| || | || ||
Sbjct 292455 AT-CGACATGGTCCACAACAACGGTGGTTTAGTTTACTTGGATGGTGCTAACATGAACGC 292397
Query 159663 ACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACA 159722
|| || ||| || || ||| |||| | ||||| ||||| ||||| | ||| | ||
Sbjct 292396 CCAAGTTGGTTTAACATCTCCAGGTGATTTAGGTGCCGATGTCTGTCACTTGAACATCCA 292337
Query 159723 TAAGACATTCTGTATT-CCACATGGAGGTGGAGGTCCTGG 159761
||||| || || ||| | ||||| ||||| ||||| ||
Sbjct 292336 CAAGACCTT-TGCATTATCCCATGGTGGTGGTGGTCCAGG 292298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588049781326480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |