Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq103 152 6e-32 >seq103 Length=904190 Score = 152 bits (168), Expect = 6e-32 Identities = 462/709 (65%), Gaps = 15/709 (2%) Strand=Plus/Plus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 ||||||| || || ||||| || ||| || || |||||||| ||||| ||||| |||| Sbjct 561393 TTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTTTCCATGAAATCGAATGGGTTAG 561452 Query 36967 ATGTATTATATATAGTACTACATGATAATT----CCTTCAGAAGCCTATCCGCAACAAAT 37022 || | | ||| || || || | | || | ||||| ||||||||| Sbjct 561453 -TGACGT---TGTAGACCTTTTTGTTACCTAGCGCAACCAATAATCTATCAGCAACAAAT 561508 Query 37023 TCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT 37082 || | |||| |||||||| | | |||| ||||| | || | ||| | || || Sbjct 561509 TCAACATATTGACACATTAAGTTACAGTTCATACCTAATAAGGAGATTGGTAAAGCGTCG 561568 Query 37083 TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATT---AACAATAACTTCT 37139 || ||| ||||| || ||||| || ||| || | ||||||||| | Sbjct 561569 ACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAATTCTTTCAACAATAACAGCA 561628 Query 37140 TCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCT 37199 || | | | | || ||||| ||||||||||| ||||||||| ||||||||| Sbjct 561629 TCTGGTCTG---TTTTGTAAATGAGAGAACAATAAACACGCAAAATCAGTGTGTAAACCT 561685 Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 || || | || ||||||||| ||||| |||||||| || ||||| |||||||| || || Sbjct 561686 TCGTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCATCAAACCTCTCTTCTTC 561745 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| || || | ||||| || ||| ||||| |||||||| || || || || || Sbjct 561746 AACCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTCGACAGCAGCGAAAGCA 561805 Query 37320 ACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCC 37379 || | | | ||| || | | || |||||| || | ||| || ||| Sbjct 561806 ACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCATCTTAAAGCCCAGTCGGCC 561865 Query 37380 TTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTA 37439 || || | ||| ||| | || || || || || | || | ||| | | Sbjct 561866 TTCTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGAAATCGGCTTCCTTTGGA 561925 Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| | || ||||| || || ||||| || | ||||||||||| ||||| || Sbjct 561926 TCTTTGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGAGTGAATGTTTTCCATCATG 561985 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 || || |||||||| |||||| | ||||| | ||| || || | | || | | | Sbjct 561986 ATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGACTTCAGCAGAGAAATTTTCA 562045 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAG-CAAGA 37607 | |||||||| || || || || ||| ||| ||||| || | ||||| Sbjct 562046 ACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAACGCCAAGA 562094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592315371035720