Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq141 104 2e-17
>seq141
Length=295507
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614
|| ||||| |||| ||| || ||||| |||||||||||||||| ||| | ||
Sbjct 197120 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 197179
Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674
|| || |||||||||||||| || | || ||||||||| | |||| || ||||||||
Sbjct 197180 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCT 197239
Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734
|||||| || || | | | ||||| | ||| || || | ||||| ||
Sbjct 197240 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTC 197299
Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||| || || ||||| |||||
Sbjct 197300 TTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614
|| ||||| |||| ||| || ||||| |||||||||||||||| ||| | ||
Sbjct 196892 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 196951
Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674
|| || |||||||||||||| || | || |||||| || | |||| || ||||||||
Sbjct 196952 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCT 197011
Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734
|||||| || || | | | ||||| | ||| || || | ||||| ||
Sbjct 197012 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTC 197071
Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||| || || ||||| |||||
Sbjct 197072 TTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614
|| ||||| |||| ||| || ||||| |||||||||||||||| ||| | ||
Sbjct 197348 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 197407
Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674
|| || |||||||||||||| || | || ||||||||| | |||| || ||||||||
Sbjct 197408 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCT 197467
Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734
|||||| || || | | | ||||| | ||| || || | ||||| ||
Sbjct 197468 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTC 197527
Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || ||||| || || || |||||
Sbjct 197528 TTACCTGTTAATGTTTTAACGAAGATTTGCAT 197559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936703963339
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |