Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq141 104 2e-17 >seq141 Length=295507 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| |||| ||| || ||||| |||||||||||||||| ||| | || Sbjct 197120 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 197179 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 || || |||||||||||||| || | || ||||||||| | |||| || |||||||| Sbjct 197180 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCT 197239 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 |||||| || || | | | ||||| | ||| || || | ||||| || Sbjct 197240 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTC 197299 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || ||||| ||||| Sbjct 197300 TTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| |||| ||| || ||||| |||||||||||||||| ||| | || Sbjct 196892 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 196951 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 || || |||||||||||||| || | || |||||| || | |||| || |||||||| Sbjct 196952 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCT 197011 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 |||||| || || | | | ||||| | ||| || || | ||||| || Sbjct 197012 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTC 197071 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || ||||| ||||| Sbjct 197072 TTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| |||| ||| || ||||| |||||||||||||||| ||| | || Sbjct 197348 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 197407 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 || || |||||||||||||| || | || ||||||||| | |||| || |||||||| Sbjct 197408 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCT 197467 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 |||||| || || | | | ||||| | ||| || || | ||||| || Sbjct 197468 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTC 197527 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || || ||||| Sbjct 197528 TTACCTGTTAATGTTTTAACGAAGATTTGCAT 197559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936703963339