Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq103 116 7e-21 >seq103 Length=904190 Score = 116 bits (128), Expect = 7e-21 Identities = 369/565 (65%), Gaps = 13/565 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | ||||||||||| || || || ||||||||||||||| || || Sbjct 562221 GAAATTTGGCAAATGTACAAGAAAGCCGAAGCGTCCTTCTGGACCGCCGAAGAAATCGAC 562162 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC--- 25588 ||| ||||| | | | |||| ||| || || || | | | || ||| Sbjct 562161 TTGGGTAAGGATACACAAGACTGGAACGAAAAATTGAACAACAATGAAAGATACTTCATT 562102 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || || | | ||||| || ||||| || ||||| ||||| || ||||| || || | Sbjct 562101 TCCAGAA--TCTTGGCGTTTTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTG 562044 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 | | ||| | ||||| || | || |||||||||||||| |||||||| || Sbjct 562043 AAAATTTCTCTGCTGAAGTCCAAACCCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATCA 561984 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACG 25768 || ||||| | ||||||||| || | ||| | || ||||| | ||| Sbjct 561983 TGATGGAAAACATTCACTCTGAGACTTACTCGTTACTTATCGACACTTACATCAAAGA-- 561926 Query 25769 TCGCCGAGAGAG---ATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || | || || || | ||| ||| ||||| |||| || | ||||||| || Sbjct 561925 TC-CAAAGGAAGCCGATTTCTTATTTAATGCTATCGATAACATTCCTTGTATCAAGAAGA 561867 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 |||| ||||| | | ||||||||| | | |||| ||||| || | | | Sbjct 561866 AGGCCGACTGGGCTTTAAGATGGATCAACGACGACGACGCTTTATTTGGTGAAAGATTAG 561807 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | || || |||||||| || || ||||| ||||| ||||||||||| |||| |||||| Sbjct 561806 TTGCTTTCGCTGCTGTCGAAGGTATCTTCTTCAGTGGTTCGTTTGCCTCCATTTTCTGGT 561747 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 | ||| ||| || ||||| || | ||| || ||||| | || | | |||| Sbjct 561746 TGAAGAAGAGAGGTTTGATGCCTGGTTTAACCTTCTCTAACGAATTGATATGTCGTGACG 561687 Query 26006 AGGGTCTCCACAGAGATTTTGCCTG 26030 | ||| | |||| |||||||| || Sbjct 561686 AAGGTTTACACACTGATTTTGCGTG 561662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842559161920