Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq101 136 3e-27 seq141 109 5e-19 >seq101 Length=125820 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 ||||||||||| || || || || ||||| ||||| ||||||||| ||| ||| || Sbjct 105476 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 105417 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| || ||| |||||||| || | || ||| Sbjct 105416 TCGGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 105357 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | ||||| || || || ||||| |||||| || ||| | | ||||| Sbjct 105356 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 105297 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| ||||| ||| | ||| |||| ||||||||| |||| || Sbjct 105296 AACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGG 105247 >seq141 Length=295507 Score = 109 bits (120), Expect = 5e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 28549 TAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608 |||| |||||||| || || ||||||||||| ||||| ||||||||| ||| || Sbjct 197564 TAAATATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGT 197505 Query 28609 CTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 | ||||| || | | | | ||||| || || ||||| || || | || || Sbjct 197504 CATCAGACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAG 197445 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 ||||||||||| | || ||||| || || ||||| |||||| | ||| | | |||| Sbjct 197444 ATCAACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATT 197385 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATT 28771 | || || ||||| ||||| || | ||| |||| |||||||| Sbjct 197384 ACAATATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATT 197342 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || || || ||||| ||||||||| ||| || | ||| Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| || || ||||| || || | || ||||||| Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || || ||||| |||||| | ||| | | ||||| || Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197152 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATT 28771 || ||||| ||||| || | ||| |||| |||||||| Sbjct 197151 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATT 197114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425403799368147