Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq138 190 1e-43
seq103 167 1e-36
>seq138
Length=177124
Score = 190 bits (210), Expect = 1e-43
Identities = 333/480 (69%), Gaps = 10/480 (2%)
Strand=Plus/Plus
Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946
||| |||| | |||| |||||| || ||| | ||| ||||||||||||||||||
Sbjct 79642 TATCTGGAGAAAATAGCGACCAATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCTG 79701
Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006
| ||||| | | ||||||||||||| | ||||||||||||||||| ||||| || || |
Sbjct 79702 GTATCCATAATCCATAAAATAAATCACGGGCTCTCATTTCTTCTTTCCCGTGGTTTTTCT 79761
Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066
| | || || | | |||||||| ||||||||||||| | ||| || |||||| |
Sbjct 79762 TCAAGTCCAATACACTGAAAATATCACAGTGCCATGGTTCAAGATATATCGCAAAAGCTC 79821
Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126
|| |||||| ||||| ||||| |||||||| || || | ||||| ||| | | ||
Sbjct 79822 CTGGTCTTTTGTTACCACCCTGATCGACGTATCTCGCTGTATTGTTGAAGACTCTTAGCA 79881
Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
| |||||||| ||| |||| || |||| ||| || | || || | | ||
Sbjct 79882 TAGGAACTAAACCACTTGATGTACCATTTGAACTAGATATGTATGAGCCACTTCCACGAA 79941
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245
| ||| |||| | || ||||| || | ||||||||| || | | || |
Sbjct 79942 CGTTATGAACATGTAGTCCAATTCCCCCGGATGCTTTTGAAATTAAGGCTGATTTATGTA 80001
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| ||| | |||| || | ||| |||| ||| ||| | | |||||| |||||||||
Sbjct 80002 A-TGTTTTATAAATACCATCTATTGAATCATCTTCCATGGCAAGTAAAAAGCAAGAAGAT 80060
Query 26306 AA----TTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA 26361
|| ||| | | | ||||| |||||||||||||| || | |||||| | ||||
Sbjct 80061 AAATAGTTG-TACTCA---GTTCCAGAATTAAATAATGTAGGAGACGCATGAATGAAATA 80116
Score = 102 bits (112), Expect = 4e-17
Identities = 329/487 (68%), Gaps = 28/487 (6%)
Strand=Plus/Plus
Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724
|||||||| ||||| ||||| | |||||| | ||||||||| |||||||||||
Sbjct 78444 GTAAATTGAATAGCTCTAGTTGCTGCCTGAGTTCTTAAATAATACATACCAGTTTTCAAG 78503
Query 24725 T-TCTTCTTCCAACCGTAAAAATGCATTGATG-TTAGTTTTGCAATGTTTGCTGATTCTA 24782
|||| | ||| | || ||||| | || || ||| || ||| ||| ||| ||
Sbjct 78504 CCTCTT-TCCCATGCATAGAAATG-ACTGCTGGTTAACTTGCCAAACGTTG--GATCCTG 78559
Query 24783 AAAACAAGT--TCATCGATTG-AGCTTGGCAAACAAAACGTTG-TCTATCTGCA-GCTAA 24837
||| || | |||| ||| |||| | ||| |||| | || ||| ||| || ||
Sbjct 78560 CAAATAAATATTCATACTTTGCAGCTGGTCAAT--AAACTTCCCTCGATC-GCATGCCAA 78616
Query 24838 GTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGT 24897
||||| || ||| ||||| || || |||| || ||| | ||||| || |
Sbjct 78617 ATCAATAATAACTTTTTGTGATATTTCCCAAACTGTCTTATATAGTTTTTTTAGTTCTTT 78676
Query 24898 TGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCTCATATT 24957
|||||| | | |||||||||| |||||| || | || ||| ||| | | |||
Sbjct 78677 CGGAATATTAGGTATATTTTGAATTGATCCGTTGT-TCATGATA-ATTTTGTTTTTCATT 78734
Query 24958 CGGTG---TCCAAAGATT---AATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGAT 25011
| || |||||| || || | |||| |||||| | || | || || | |
Sbjct 78735 -GATGCATTCCAAA--TTCCCAAATCAATCAA-ATCTCTCAATAAATACTTGTTAACTAC 78790
Query 25012 AATAAATTCTCCAGACAAAACTCTTCTTATTG-ATAAGTTTGAAGTGAATGGTTCAAAAC 25070
| |||| || || ||||||| ||| |||| |||| || || || ||||||| || |
Sbjct 78791 TTGATATTCACCTGATAAAACTCGTCT-ATTGTATAAATTGGACGTATATGGTTCGAAGC 78849
Query 25071 ATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCG 25130
|||||||| |||||| ||||| || ||||||||||| |||||| ||||| || | |
Sbjct 78850 ATTCATTAAATCCTAAAATTTGGGATGTAGATGCTGTAGGCATTGGTGCTACTAGCAATG 78909
Query 25131 AATTTCT 25137
|||||||
Sbjct 78910 AATTTCT 78916
>seq103
Length=904190
Score = 167 bits (184), Expect = 1e-36
Identities = 326/479 (68%), Gaps = 2/479 (0%)
Strand=Plus/Plus
Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948
|||||| ||||||| ||| ||| | ||||| |||||| ||| ||| |||||||| |||
Sbjct 448991 TTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAATAAATCAGGA 449050
Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008
||||| | || ||||||||||| ||||| |||||||||| |||||||||||| |
Sbjct 449051 ATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTTTCTG 449110
Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068
| ||||| ||| || || ||||| | ||||| ||||| || || | |||||| |||
Sbjct 449111 ATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCA 449170
Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128
||| || ||||||||||| || || | || || | || ||||| | ||||
Sbjct 449171 GGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATT 449230
Query 26129 GGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188
|||| | ||| | ||| ||||| || | || | | || || || | |||
Sbjct 449231 GGAATGATACCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATG 449290
Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAAC 26247
| |||| || | ||| || ||||| || | || ||||| ||||| ||| ||
Sbjct 449291 TTGTGAATGTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAA- 449349
Query 26248 TGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAA 26307
|| ||| | || || | ||| ||| | ||||| | | ||| ||||||||||| |
Sbjct 449350 GGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACAT 449409
Query 26308 TTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366
||| | || || || | ||||||||| || || | | | || || | |||| ||
Sbjct 449410 TTGTGGGCTAGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTT 449468
Score = 109 bits (120), Expect = 3e-19
Identities = 123/165 (75%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
|||||| |||| |||||||||||| | | ||||||||| ||||||| ||||||||
Sbjct 448141 AAATTCACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTC 448200
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
||| || ||||| ||||||||||| || || |||||||| || | ||||| || ||
Sbjct 448201 ATTGTTCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTT 448260
Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
||| | ||| | ||| | | | ||| || || ||||||| ||
Sbjct 448261 TCTGATACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTC 448305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039404802475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |