Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq141 125 8e-24 >seq141 Length=295507 Score = 125 bits (138), Expect = 8e-24 Identities = 192/271 (71%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 |||||| || | || || | ||| ||| || || | | ||||| || || || || Sbjct 293398 ACCATGGTAAACCGCGTACATCGCAGCCATGTTAGCCAATAAAGCTTGAGCAGTACAAAT 293457 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| || || || || | ||||||| |||||||| ||||||| ||| ||||| | Sbjct 293458 ATTAGATGTAGCCTTTTCACGCTTAATATGTTGCTCTCTCGTTTGTAATGCCAATCTCAA 293517 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||| || |||||| || ||| ||| ||| |||||||| ||||| ||||| | Sbjct 293518 TGCTGGCTTGCCTAATCTATCCTTTGATAAACCAACAATTCTACCAGGAATCTTACGGGA 293577 Query 139451 ATACTTGTCTGTTG-TTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATAC 139509 || || ||||| |||| || ||||| ||||| ||||| ||||| || | ||||| || Sbjct 293578 GTATTTCA-TGTTGGTTGCGAAAAATGCTGCATGTGGACCACCGTAACCGAAAGGAACAC 293636 Query 139510 CAAACCTTTGCATACTACCTACAGCAATATC 139540 |||||||||| | |||||| ||||| || Sbjct 293637 CAAACCTTTGTGAAGTACCTAATGCAATGTC 293667 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || | || ||||| ||||||| |||| || || ||||| || ||| || Sbjct 294001 CATTGCTTCACCCGCAGCAGTACCTTCATCCAATAACGAAGCATTTGCCATGTTTAAACC 294060 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || | || | | ||||||||||| ||||| | |||||||| || || || || Sbjct 294061 AGTCAACGAGGTAACCATGGTTTGGTAATTCAATAACGACTCCAATCTACCTTGTGAGAT 294120 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCA-ACTAG-GATTCTCAAGAACGTTTCGC 140036 || | ||| || || || ||||| |||||||| || | ||||| ||| || ||||| Sbjct 294121 TTCTGGTTGGTATGGTGTATAAGAGGTGTACCATTCTGGCGATTC-CAATAA-GTTTCTT 294178 Query 140037 TGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082 || || |||||||| ||||||| ||| || | ||| |||| Sbjct 294179 TGGATCACTGGGGGAACCTTGGTTCCGGCGTAACCCTTACCAATAA 294224 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 138201 CCAGGACCTCCACCTCCATGTGG-AATACAGAATGTCTTATGTAAATTTAGATGACATAC 138259 || ||||| ||||| ||||| | ||| || || ||||| || | || | ||||| || Sbjct 292298 CCTGGACCACCACCACCATGGGATAATGCA-AAGGTCTTGTGGATGTTCAAGTGACAGAC 292356 Query 138260 ATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATC 138319 ||| ||||| | |||| ||| || || ||| || || || || | || |||||||| Sbjct 292357 ATCGGCACCTAAATCACCTGGAGATGTTAAACCAACTTGGGCGTTCATGTTAGCACCATC 292416 Query 138320 GAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCT-GATGTTTGTTT 138378 | || || |||||| |||| || || || | || |||| ||| || || Sbjct 292417 CAAGTAAACTAAACCACCGTTGTTGTGGACCATGTCG-ATGGAAGTCTTGATACCTGGTT 292475 Query 138379 CAAATACACCATGAGTCGATGGATATGTAATCATAATACA 138418 |||||| ||| | |||||||| ||||| ||||||||||| Sbjct 292476 CAAATAAACCGTATGTCGATGGGTATGTGATCATAATACA 292515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997003166360