Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq141 125 8e-24
>seq141
Length=295507
Score = 125 bits (138), Expect = 8e-24
Identities = 192/271 (71%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330
|||||| || | || || | ||| ||| || || | | ||||| || || || ||
Sbjct 293398 ACCATGGTAAACCGCGTACATCGCAGCCATGTTAGCCAATAAAGCTTGAGCAGTACAAAT 293457
Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390
||| || || || || | ||||||| |||||||| ||||||| ||| ||||| |
Sbjct 293458 ATTAGATGTAGCCTTTTCACGCTTAATATGTTGCTCTCTCGTTTGTAATGCCAATCTCAA 293517
Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450
||| || |||||| || ||| ||| ||| |||||||| ||||| ||||| |
Sbjct 293518 TGCTGGCTTGCCTAATCTATCCTTTGATAAACCAACAATTCTACCAGGAATCTTACGGGA 293577
Query 139451 ATACTTGTCTGTTG-TTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATAC 139509
|| || ||||| |||| || ||||| ||||| ||||| ||||| || | ||||| ||
Sbjct 293578 GTATTTCA-TGTTGGTTGCGAAAAATGCTGCATGTGGACCACCGTAACCGAAAGGAACAC 293636
Query 139510 CAAACCTTTGCATACTACCTACAGCAATATC 139540
|||||||||| | |||||| ||||| ||
Sbjct 293637 CAAACCTTTGTGAAGTACCTAATGCAATGTC 293667
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
|||||| || | || ||||| ||||||| |||| || || ||||| || ||| ||
Sbjct 294001 CATTGCTTCACCCGCAGCAGTACCTTCATCCAATAACGAAGCATTTGCCATGTTTAAACC 294060
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| | || | | ||||||||||| ||||| | |||||||| || || || ||
Sbjct 294061 AGTCAACGAGGTAACCATGGTTTGGTAATTCAATAACGACTCCAATCTACCTTGTGAGAT 294120
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCA-ACTAG-GATTCTCAAGAACGTTTCGC 140036
|| | ||| || || || ||||| |||||||| || | ||||| ||| || |||||
Sbjct 294121 TTCTGGTTGGTATGGTGTATAAGAGGTGTACCATTCTGGCGATTC-CAATAA-GTTTCTT 294178
Query 140037 TGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082
|| || |||||||| ||||||| ||| || | ||| ||||
Sbjct 294179 TGGATCACTGGGGGAACCTTGGTTCCGGCGTAACCCTTACCAATAA 294224
Score = 86.0 bits (94), Expect = 7e-12
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 138201 CCAGGACCTCCACCTCCATGTGG-AATACAGAATGTCTTATGTAAATTTAGATGACATAC 138259
|| ||||| ||||| ||||| | ||| || || ||||| || | || | ||||| ||
Sbjct 292298 CCTGGACCACCACCACCATGGGATAATGCA-AAGGTCTTGTGGATGTTCAAGTGACAGAC 292356
Query 138260 ATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATC 138319
||| ||||| | |||| ||| || || ||| || || || || | || ||||||||
Sbjct 292357 ATCGGCACCTAAATCACCTGGAGATGTTAAACCAACTTGGGCGTTCATGTTAGCACCATC 292416
Query 138320 GAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCT-GATGTTTGTTT 138378
| || || |||||| |||| || || || | || |||| ||| || ||
Sbjct 292417 CAAGTAAACTAAACCACCGTTGTTGTGGACCATGTCG-ATGGAAGTCTTGATACCTGGTT 292475
Query 138379 CAAATACACCATGAGTCGATGGATATGTAATCATAATACA 138418
|||||| ||| | |||||||| ||||| |||||||||||
Sbjct 292476 CAAATAAACCGTATGTCGATGGGTATGTGATCATAATACA 292515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997003166360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |