Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq141 172 1e-37 seq101 147 4e-30 >seq141 Length=295507 Score = 172 bits (190), Expect = 1e-37 Identities = 186/245 (76%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| ||||||| | |||| || ||||| | || || ||||| Sbjct 197323 AATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATT 197382 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || ||||| ||||| ||| |||||||| || ||||||||||||||||||||||| Sbjct 197383 GTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTG 197442 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || ||||| || ||||| || |||| || | || ||| || || || Sbjct 197443 ATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGA 197502 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT-TT 193362 ||||||||||||| || || || |||||||||| ||||| || || |||||||| || Sbjct 197503 TGACTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATT 197562 Query 193363 TATTA 193367 ||||| Sbjct 197563 TATTA 197567 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| ||||||| | |||| || ||||| | || || ||||| Sbjct 197095 AATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATT 197154 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || ||||| ||||| ||| |||||||| || ||||||||||||||||||||||| Sbjct 197155 GTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTG 197214 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || ||||| || ||||| || |||| || | || ||| || || || Sbjct 197215 ATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGA 197274 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||||||| || || || |||||||| | || || || || |||||||| Sbjct 197275 TGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Score = 154 bits (170), Expect = 3e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193123 TAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182 ||| |||| |||||||||||||| | |||| || ||||| | || || |||| Sbjct 196866 TAACTTATTGACCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATAT 196925 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 | || || ||||| ||||| ||| |||||||| || |||||||||||||||||||||| Sbjct 196926 TGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTT 196985 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 | || || || || ||||| || ||||| || |||| || | || ||| || || | Sbjct 196986 GGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTG 197045 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||||||||||| || || || |||||||| | || || || || |||||||| Sbjct 197046 ATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103 >seq101 Length=125820 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| | |||| || || || | || || ||| || || || || Sbjct 105246 ACCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGA 105305 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| |||||| ||| |||||||| || || || || |||||||| ||||||||||| || Sbjct 105306 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 105365 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||| ||||| || || | || | ||| ||| || || ||||| ||||| Sbjct 105366 AATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 105425 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || || || ||||| |||| || || || || ||||||||||| Sbjct 105426 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899652229583760