Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq141 172 1e-37
seq101 147 4e-30
>seq141
Length=295507
Score = 172 bits (190), Expect = 1e-37
Identities = 186/245 (76%), Gaps = 1/245 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| ||||||| | |||| || ||||| | || || |||||
Sbjct 197323 AATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATT 197382
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || ||||| ||||| ||| |||||||| || |||||||||||||||||||||||
Sbjct 197383 GTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTG 197442
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || ||||| || ||||| || |||| || | || ||| || || ||
Sbjct 197443 ATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGA 197502
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT-TT 193362
||||||||||||| || || || |||||||||| ||||| || || |||||||| ||
Sbjct 197503 TGACTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATT 197562
Query 193363 TATTA 193367
|||||
Sbjct 197563 TATTA 197567
Score = 158 bits (174), Expect = 2e-33
Identities = 177/237 (75%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| ||||||| | |||| || ||||| | || || |||||
Sbjct 197095 AATTTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATT 197154
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || ||||| ||||| ||| |||||||| || |||||||||||||||||||||||
Sbjct 197155 GTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTG 197214
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || ||||| || ||||| || |||| || | || ||| || || ||
Sbjct 197215 ATCTGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGA 197274
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||||||| || || || |||||||| | || || || || ||||||||
Sbjct 197275 TGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Score = 154 bits (170), Expect = 3e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 193123 TAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182
||| |||| |||||||||||||| | |||| || ||||| | || || ||||
Sbjct 196866 TAACTTATTGACCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATAT 196925
Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242
| || || ||||| ||||| ||| |||||||| || ||||||||||||||||||||||
Sbjct 196926 TGTAATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTT 196985
Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302
| || || || || ||||| || ||||| || |||| || | || ||| || || |
Sbjct 196986 GGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTG 197045
Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||||||||||| || || || |||||||| | || || || || ||||||||
Sbjct 197046 ATGACTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
>seq101
Length=125820
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||| |||| | |||| || || || | || || ||| || || || ||
Sbjct 105246 ACCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGA 105305
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| ||| |||||||| || || || || |||||||| ||||||||||| ||
Sbjct 105306 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 105365
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| ||||| || || | || | ||| ||| || || ||||| |||||
Sbjct 105366 AATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 105425
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| || || || ||||| |||| || || || || |||||||||||
Sbjct 105426 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652229583760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |