Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq103 194 3e-44
seq101 165 1e-35
seq141 158 2e-33
>seq103
Length=904190
Score = 194 bits (214), Expect = 3e-44
Identities = 373/545 (68%), Gaps = 15/545 (3%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|| ||||| ||| ||| | |||||||| ||||| || || || |||| || ||
Sbjct 561371 TTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTT 561430
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATA-ATATTTTTCT--CCTATCAATACATAT 38948
| ||| ||||| ||||| || || || || | ||||| | |||| | ||
Sbjct 561431 TCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCTAGCGCAACC--- 561487
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
||||||||||| || ||||||||||||||||| ||||||| | ||| |||||||| |||
Sbjct 561488 AATAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCATACCTAAT 561547
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
|| | |||||| || || ||| ||||| ||||| || || ||||||| ||||
Sbjct 561548 AAGGAGATTGGTAAAGCGTCGACAAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATA 561607
Query 39069 atcat---aattatattattttttgataatttatatttaatatgattcgcatataGTAAA 39125
|| | || ||| | | || | || | | | |||| | | | ||||
Sbjct 561608 ATTCTTTCAACAATAACAGCATCTGGTCTGTTTTGT---AAATGA---GAGAACAATAAA 561661
Query 39126 CATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 39185
|| |||||||| || |||||||||||||| | | |||| ||||| ||| || |||||
Sbjct 561662 CACGCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTTAAA 561721
Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245
|| ||||| || |||||||| || | ||| || || || ||||| || | |||||
Sbjct 561722 CCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAGAAG 561781
Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305
||||| || ||| || || || | || |||| | ||||| | | || ||
Sbjct 561782 ATACCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCGTTG 561841
Query 39306 ATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 39365
||||| ||| ||||| || || || || |||||| |||| || || || ||||| |||
Sbjct 561842 ATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCATTA 561901
Query 39366 AATAA 39370
|||||
Sbjct 561902 AATAA 561906
>seq101
Length=125820
Score = 165 bits (182), Expect = 1e-35
Identities = 180/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || ||| || || |||||||| | || || ||| ||
Sbjct 105238 TTCTTACCACCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTG 105297
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
||||| ||||| | || | || || ||||| |||||||| || |||||||| |||||
Sbjct 105298 TAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGA 105357
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || |||||||| ||||| || ||| || ||||| || || || ||
Sbjct 105358 TCAGGTGGAATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCCGAA 105417
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||||| |||||||| ||||||||||| || || | ||| || ||||||||
Sbjct 105418 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476
>seq141
Length=295507
Score = 158 bits (174), Expect = 2e-33
Identities = 179/239 (75%), Gaps = 1/239 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || | || ||| || || ||||| || | || || ||||| |||||
Sbjct 197330 ATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCA 197389
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || | || || ||||| ||||| |||||||||||||||||||| || ||
Sbjct 197390 GATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGC 197449
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || || || ||||| || ||
Sbjct 197450 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCA 197509
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTATTAT 172077
||||||| |||||||| ||||| ||||||||||||| ||| || ||||| ||||||||
Sbjct 197510 ACTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATTTATTAT 197568
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || ||| || || ||||| || | || || ||||| ||||| ||
Sbjct 196876 ACCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGA 196935
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
||| | || | || || ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 196936 TAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGG 196995
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| || || || || || || || ||||| || || ||
Sbjct 196996 AATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197055
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| ||||| || || || || | ||| || |||||
Sbjct 197056 TTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || | || ||| || || ||||| || | || || ||||| |||||
Sbjct 197102 ATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCA 197161
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || | || || ||||| ||||| |||||||||||||||||||| || ||
Sbjct 197162 GATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGC 197221
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || || || ||||| || ||
Sbjct 197222 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCA 197281
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| |||||||| ||||| || || || || | ||| || |||||
Sbjct 197282 ACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905133816359400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |