Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq138 183 9e-41
seq103 123 7e-23
seq102 123 7e-23
seq105 96.9 1e-14
>seq138
Length=177124
Score = 183 bits (202), Expect = 9e-41
Identities = 514/782 (66%), Gaps = 19/782 (2%)
Strand=Plus/Plus
Query 155600 ATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAG 155658
|||||| || ||||| || | || | || ||||| ||||||||||| || |||||||
Sbjct 79370 ATTACAAACAGCAGTTTCTTCTGGTGACGAA-TATTCAACAATCTCACAACAAAGGTTAG 79428
Query 155659 AACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATA 155718
| ||| || || |||||||||| ||||| ||||| ||||| ||||| ||||| |
Sbjct 79429 ATGACTTAATAGTTCCTAAATTCTGTTGGTTTGATTTCAGATTACATGCATCTTTGTACA 79488
Query 155719 GAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGG 155778
||||| || ||| || || | || || || ||| |||| | | | |
Sbjct 79489 ACATGTACGGACCTCCAGTTTCGGTTTGACATTCTAGTATCGAACGCCATAATTTTTGAG 79548
Query 155779 CATTAA-----TTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCG 155833
| || | ||| || |||| | | ||| ||||| || ||| || ||
Sbjct 79549 CTTTGACAGTCTTTACTGCTTGTCCC-GTGTTC----TCATACTTTTCATAGAGTTCTCT 79603
Query 155834 GTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCA 155893
| |||| || || |||||||| || | ||||||| | ||||| || |||| ||||||||
Sbjct 79604 GAAATCGTCTCCATAACAATCGCTTAATCCAGGGGAGTTATCTGGAGAAAATAGCGACCA 79663
Query 155894 AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAG 155953
| | || |||| | ||||||||||| ||| ||| | |||| || |
Sbjct 79664 ATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCTGGTATCCATAATCCATAAAATAA 79723
Query 155954 GTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAAT 156013
|| | || | || || | ||||| || ||| | || || | |||
Sbjct 79724 ATCACGGGCTCTCATTTCTTCTTTCCCGTGGTTTTTCTTCAAGTCCAATACACTGAAAAT 79783
Query 156014 ATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTG 156070
|||| || ||| || ||||| || |||||| || || ||| ||||||||
Sbjct 79784 ATCACAGTGCCATGGTTCAAGATATATCGCAAAAGCTCCTGGTCTTTTGTTACCACCCTG 79843
Query 156071 ATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGT 156130
||| || || | || || || |||||||| | ||||||||||| | |||| | || ||
Sbjct 79844 ATCGACGTATCTCGCTGTATTGTTGAAGACTCTTAGCATAGGAACTAAACCACTTGATGT 79903
Query 156131 GCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAAT 156190
||||| | | || | || ||| | ||||| ||||||| ||||||||||||
Sbjct 79904 ACCATTTGAACTAGATATGTATGAGCCACTTCCACGAACGTTATGAACATGTAGTCCAAT 79963
Query 156191 ACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAAT 156250
|| || || ||| |||||| || ||| | || || || ||||||| || ||
Sbjct 79964 TCCCCCGGATGCTTTTGAAATTAAGGCTGATTTATGTAATGTTTTATAAATACCATCTAT 80023
Query 156251 AGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGT--GTTCCA 156308
|||||||||||||| | |||| | |||| ||| ||| | || || | ||||||
Sbjct 80024 TGAATCATCTTCCATGGCAAGTAAAAAGCAAGAAGATAAAT--AGTTGTACTCAGTTCCA 80081
Query 156309 GCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTC 156368
| || |||| |||||| | |||||||| |||||||| | ||||| | || |||||
Sbjct 80082 GAATTAAATAATGTAGGAGACGCATGAATGAAATACTTCTGCGACATCAATTCATATGTT 80141
Query 156369 TC 156370
||
Sbjct 80142 TC 80143
>seq103
Length=904190
Score = 123 bits (136), Expect = 7e-23
Identities = 239/352 (68%), Gaps = 3/352 (1%)
Strand=Plus/Plus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| || | |||||||||||| | | |||| ||| || ||||| | ||| ||
Sbjct 449087 TCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGT 449146
Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086
|||| || | |||||| |||| |||||| ||||| ||||| ||||| |||||
Sbjct 449147 TCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCG 449206
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| || || || |||| | ||| ||||| |||||||| ||||| || ||||| |||
Sbjct 449207 GTGTTGTTAAAAACACGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTACCGGCG 449266
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206
|| | | ||||| || |||| || ||||| |||| ||||| ||||||| | ||
Sbjct 449267 ATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCACTCTTG 449326
Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266
||||| ||| || ||| | || | | | ||||| ||||| || ||||| | |||
Sbjct 449327 GAAATCAAAGCACACGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATCCTTCATA 449386
Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATA 156318
| | || | || ||| | ||| || | || || ||||| || ||||
Sbjct 449387 GCAACTAAGAAACAAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATA 449438
Score = 91.5 bits (100), Expect = 4e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||||||||| |||| |||||| |||||| | ||||| ||||| || ||
Sbjct 448747 GTATTCAACAATCTCACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTTTGATT 448806
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || |||||||||||||||| |||| || |||| || || || || | |||||
Sbjct 448807 GGTCTTCTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTTTGTGC 448866
Query 155750 GTCCA 155754
||||
Sbjct 448867 ATCCA 448871
Score = 89.7 bits (98), Expect = 2e-12
Identities = 176/258 (68%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
|||||| ||||||||||||||||| | |||||||||||| | ||| | ||||||||| |
Sbjct 299114 AGCACCATGAGCAATCATACAATCTCTTTCCATTTCACCGAAACGTAAACCACCATCTCT 299173
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391
||| ||||||| || | ||| | ||||| || ||||| ||| | | |
Sbjct 299174 TGATCTACCCTCAACGGGTTGTCTTGTTAAGACTTGAACCGGACCTCTAGCCCTAGCGTG 299233
Query 233392 AATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTC 233451
||| || || | |||||| || | | ||| |||||| ||||||| || | |
Sbjct 299234 AATCTTGTCATCAACCATGTGTCTTAATCTTTGATAATACGTTGGACCAAAGAAAATCTG 299293
Query 233452 TGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTACCCGATGAATTG-T 233510
||| ||||| || || | | ||| |||| | ||||||| |||| | |||| |
Sbjct 299294 TGCCATTAATTTTTTACCTGTGTGGCCGTTGTACATAACTTCA-AACCCTCTTGATTGAT 299352
Query 233511 AACCAATATCTTTTAATA 233528
||||| ||| | ||||
Sbjct 299353 AACCATGCTCTCTCAATA 299370
>seq102
Length=776775
Score = 123 bits (136), Expect = 7e-23
Identities = 345/522 (66%), Gaps = 17/522 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| ||||| | | | || || ||||| ||||| || ||||| || |
Sbjct 654755 CTATCAAATCTACCTGGTCTCATCAAAGCCTTATCTAAAATATCAGCCCTGTTAGTACCA 654696
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
||||| ||||||| || | | ||||||||||| ||| | ||||||
Sbjct 654695 GCCAAAACAACAACGTGGTCAGAACTTTCGAATCCATCCATTTCGACTAACAATTGATTC 654636
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACC---CGAATCGCTCCttttt 289026
| || ||| | ||||||||| | || |||| || ||| ||| | || |
Sbjct 654635 AACGTAGTTTCACGTTCATCATTAGCTCCACTTGCATTACCTTTTGAA------CGTTGT 654582
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||| |||||||| || || | ||| | | | |||||||| | | ||| |
Sbjct 654581 TTACCAATTGCATCAATCTCATCGACGAATACAATTGATGGAGAATTCTCACGGGCAGTC 654522
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
||| || || | ||||| ||||| |||| ||||||| ||||||| || |||||||||
Sbjct 654521 TTAAACAAATCACGAACACGAGATGCACCAACACCAACAAACATTTCAACGAATTCAGAA 654462
Query 289147 GCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205
| || || || | ||||| ||| | ||||| ||||| |||| | || | ||| ||
Sbjct 654461 CCTGAAAC-AGAGTAGAATGGAACACTGGCTTCACCTGCAGTTGCCTTGGCTATAAGCGT 654403
Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265
|||||| || || ||||| || ||| | | || | || | ||| || || ||
Sbjct 654402 CTTACCAGTACCTGGTGGACCTGATAAAATCGCACCTCTAGGAATTTTAGCTCC--CAAT 654345
Query 289266 CTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323
|| || || |||||| | | |||||| | || | |||| || ||| | ||| |||
Sbjct 654344 TTTTCGTACTTTTCAGGGTTTTGTAAAAACTTCACGAATTCCATAACTTCTTCTTTCGCC 654285
Query 289324 TCATCACAT-CCTGCTACATCAGCAAAAGTAATATTAATATC 289364
|| |||| || || ||||| ||| |||| || |||||
Sbjct 654284 TC-GGACATCCCAGCAACATCCTTAAATCTAATTTTTATATC 654244
>seq105
Length=815575
Score = 96.9 bits (106), Expect = 1e-14
Identities = 116/157 (74%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | || ||| |||||||| || || || ||| || | |||||| |||
Sbjct 70851 AGAATTTCCTTAAGACGAGGAACACCCAAAGTAACATT---CTTTGAAGAAACACCTGCA 70795
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| ||||||||||||| || | ||| || | ||| ||||||||| || || |||||
Sbjct 70794 TAATGGAAAGTATTCAACGTCATTTGCGTCGCTGGTTCACCAATAGACTGGGCTGCAATG 70735
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGACTTCT 301969
| |||||||||||| || || ||||| |||||||
Sbjct 70734 ACACCAACCATTTCACCAGGGTGAACAATCGACTTCT 70698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471813960471041
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |