Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq101 127 2e-24 seq141 122 8e-23 >seq101 Length=125820 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || |||| ||||| || ||||| | ||||| ||| | | Sbjct 105473 ATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCG 105414 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||||||||| || || || |||||| Sbjct 105413 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAA 105354 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || ||||| || || || || | || ||| |||| | | || ||||| ||| Sbjct 105353 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAAC 105294 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||||||||||||| || |||||||||| || |||| Sbjct 105293 ATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATT 105256 >seq141 Length=295507 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| ||||||| |||| ||||| || ||||| | ||||| || | | Sbjct 197559 ATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197500 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || |||||| Sbjct 197499 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197440 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || |||||||| || || | || ||| |||| | || ||||| || Sbjct 197439 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197380 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| ||| |||||||||| || ||||| | || || Sbjct 197379 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGG 197333 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || ||||| || ||||| | ||||| || | | Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || |||||| Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || |||||||| || || | || ||| |||| | || ||||| || Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197152 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| ||| |||||||||| || ||||| | || || Sbjct 197151 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGG 197105 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || ||||| || ||||| | ||||| || | | Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || || ||| Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || |||||||| || || | || ||| |||| | || ||||| || Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 196924 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| ||| |||||||||| || ||||| | || || Sbjct 196923 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGG 196877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896514622040