Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq141 98.7 8e-16 seq101 91.5 1e-13 >seq141 Length=295507 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| ||||| ||||| || ||||||||| | ||| ||| | Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || |||||| || || ||||| | || || || Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| ||| ||||| || | || || | || |||| | | || ||||| Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 196924 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || || ||| |||| || |||||| |||| || Sbjct 196923 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGG 196877 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| ||||| ||||| || ||||||||| | ||| ||| | Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || |||||| || || ||||| | || ||||| Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| ||| ||||| || | || || | || |||| | | || ||||| Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197152 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781 || |||||||| || || || ||| |||| || ||||| |||||| Sbjct 197151 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATT--GAGGGG 197108 >seq101 Length=125820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||||||||| ||||| |||||||| || || ||||||||| | ||| || || Sbjct 105476 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 105417 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || | | | | || || ||||| || |||||||| | || ||| Sbjct 105416 TCGGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 105357 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | || ||||| || | || || | | ||| | | || ||| Sbjct 105356 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 105297 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||| || || || ||| |||| || ||||| |||| || Sbjct 105296 AACATTCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTAAGAGGTGG 105247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875861766977