Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq101 131 1e-25
seq141 104 2e-17
>seq101
Length=125820
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| || | |||||||| ||||||||||| ||||| | | ||| | | ||| ||
Sbjct 105265 ACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCT 105324
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
| ||| || ||||| | || |||||||| ||||| || |||||||| |||||||||||
Sbjct 105325 AATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 105384
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| || |||||| | || | ||||| ||| ||| ||||| | || || || ||
Sbjct 105385 ATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGGTCTTA 105444
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||||||| || || || || || ||||||||
Sbjct 105445 CCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476
>seq141
Length=295507
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | | ||||| || | |||||||| ||||| || || ||||| |
Sbjct 197333 CCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 197392
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || || ||| | || ||||| || ||||| ||||||
Sbjct 197393 AATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGA 197452
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | ||||| | || | ||||| || || ||
Sbjct 197453 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197511
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||| | || || || || || ||||| |||||||| || || ||||| ||
Sbjct 197512 TTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATT 197562
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | | ||||| || | |||||||| ||||| || || ||||| |
Sbjct 197105 CCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 197164
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || || ||| | || ||||| || ||||| ||||||
Sbjct 197165 AATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGA 197224
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | ||||| | || | ||||| || || ||
Sbjct 197225 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197283
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | || || || || || || || || || || || || |||||
Sbjct 197284 TTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218293892213
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |