Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq101 131 1e-25 seq141 104 2e-17 >seq101 Length=125820 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| || | |||||||| ||||||||||| ||||| | | ||| | | ||| || Sbjct 105265 ACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCT 105324 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || ||||| | || |||||||| ||||| || |||||||| ||||||||||| Sbjct 105325 AATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 105384 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | || |||||| | || | ||||| ||| ||| ||||| | || || || || Sbjct 105385 ATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGGTCTTA 105444 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||||| || || || || || |||||||| Sbjct 105445 CCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476 >seq141 Length=295507 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | | ||||| || | |||||||| ||||| || || ||||| | Sbjct 197333 CCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 197392 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || || ||| | || ||||| || ||||| |||||| Sbjct 197393 AATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGA 197452 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| || | ||||| | || | ||||| || || || Sbjct 197453 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197511 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| | || || || || || ||||| |||||||| || || ||||| || Sbjct 197512 TTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATT 197562 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | | ||||| || | |||||||| ||||| || || ||||| | Sbjct 197105 CCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 197164 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || || ||| | || ||||| || ||||| |||||| Sbjct 197165 AATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGA 197224 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| || | ||||| | || | ||||| || || || Sbjct 197225 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAAC 197283 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || || || || || || || || || || || ||||| Sbjct 197284 TTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218293892213