Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq103 87.8 2e-12 >seq103 Length=904190 Score = 87.8 bits (96), Expect = 2e-12 Identities = 224/336 (67%), Gaps = 15/336 (4%) Strand=Plus/Minus Query 192789 GAACTTCATCCTTGTGGAATGTTTGGAATTGTAGCTGGAGTTATACCATTTTCCGATAGA 192848 ||| ||||||||| | || || || ||| ||| | |||| || || | || Sbjct 300319 GAAATTCATCCTTCTATGATTTTAGGTGTTGCGGCTTCAATTATTCCCTTCCCAGACCAT 300260 Query 192849 ACACAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGATTTATT 192908 | |||||| |||| || | | | || |||||| ||||||||| || || || || Sbjct 300259 AATCAATCTCCTCGTAATACATATCAATCTGCTATGGGTAAACAAGCGATGGGTGTT-TT 300201 Query 192909 CCGTGTCACAACTTA-------AAAACGGAAACAGTATCTCATACATTAAATTATCCACA 192961 || | |||| ||| | || ||| ||| | | ||| ||| |||||||||| Sbjct 300200 CC---TAACAAATTATGCTGTAAGAATGGATACAATGGCCAATATCTTATATTATCCACA 300144 Query 192962 AAAACCCCTTGTTACCAC-AGATAT-TGCAAAATTTAATAAATTAGACGATTATCCAAAT 193019 |||||| | | ||| || |||| | || | |||| | | || || | || | Sbjct 300143 AAAACCATTAGCTACAACTAGATCTATGGAGTATTTGA--AGTTCCGTGAATTGCCTGCT 300086 Query 193020 GGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATT 193079 ||| ||||| |||||||| || || || || ||||||||||||||||||| ||| Sbjct 300085 GGTCAAAATGCCATTGTTGCAATTGCCTGTTACTCTGGTTATAATCAAGAAGATTCTATG 300026 Query 193080 ATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTT 193115 ||| | ||| || | || ||||| ||||| |||||| Sbjct 300025 ATTATGAATCAATCATCAATTGACAGAGGTTTATTT 299990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635176067634040