Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq138 196 1e-44 seq103 183 7e-41 seq112 96.9 8e-15 seq66 95.1 3e-14 seq105 87.8 4e-12 >seq138 Length=177124 Score = 196 bits (216), Expect = 1e-44 Identities = 467/691 (68%), Gaps = 25/691 (4%) Strand=Plus/Minus Query 110466 ATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAA----TTGGCTTC 110521 |||||||| ||||||| ||||||| | |||||| ||| |||| || |||| Sbjct 80110 ATTCATGCGTCTCCTACATTATTTAATTCTGGAACT----GAGTACAACTATTTATCTTC 80055 Query 110522 TTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGA 110581 ||||||| | || | || | |||||||| || || ||||||||| | | ||| | | Sbjct 80054 TTGCTTTTTACTTGCCATGGAAGATGATTCAATAGATGGTATTTATAAAACA-TTACATA 79996 Query 110582 AA-CTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCT 110640 || | || | ||||| ||| || || |||||||| | || |||||| | |||| Sbjct 79995 AATCAGCCTTAATTTCAAAAGCATCCGGGGGAATTGGACTACATGTTCATAACGTTCGTG 79936 Query 110641 CAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAA 110700 || || || | || | | | || ||| | |||| ||| | ||||| ||| ||| Sbjct 79935 GAAGTGGCTCATACATATCTAGTTCAAATGGTACATCAAGTGGTTTAGTTCCTATGCTAA 79876 Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCAT 110757 ||||||||||| | || || | ||| || |||| |||||||| | || || | | Sbjct 79875 GAGTCTTCAACAATACAGCGAGATACGTCGATCAGGGTGGTAACAAAAGACCAGGAGCTT 79816 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGT-AAA 110816 |||| || ||||| ||||| ||||| | ||||| ||| | | | | |||| ||| Sbjct 79815 TTGCGATATATCTTGAACCATGGCACTGTGATAT-TTTCAGTGTATTGGACTTGAAGAAA 79757 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 || || || |||||| ||||| |||||||||||||||| | | ||||| ||||| Sbjct 79756 AACCACGGGAAAGAAGAAATGAGAGCCCGTGATTTATTTTATGGATTATGGATACCAGAT 79697 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 ||||| ||| | | || || || || ||||| || | | ||| || || Sbjct 79696 TTATTTATGGAGAGAGTAAAACAAGATTTAGATTGGTCGCTATTTTCTCCAGATAACTCC 79637 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAA 110996 ||||| || ||| |||||| | || || ||| || || ||||| ||||| || Sbjct 79636 CCTGGATTAAGCGATTGTTATGGAGACGATTTCAGAGAACTCTATGAAAAGTATGAGAAC 79577 Query 110997 GAAGG-CAAGTTTCGCAAACAAATTCCA-GCTCAAGAACTTTGG--TTCAAAATCCTTGA 111052 || |||| | ||| | || | |||||| || | ||| ||| | | || || Sbjct 79576 ACGGGACAAGCA--GTAAAGACTGTCAAAGCTCAAAAATTATGGCGTTCGATA--CTAGA 79521 Query 111053 ATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAAT 111111 || ||| ||||||||| ||| || || ||||| |||||| ||| | |||| |||| Sbjct 79520 ATGTCAAACCGAAACTGGAGGTCCGTACATGTTGTACAAAGATGCATGT-AATCTGAAAT 79462 Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTC 111142 | || ||| |||||||||||| |||||||| Sbjct 79461 CAAACCAACAGAATTTAGGAACTATTAAGTC 79431 >seq103 Length=904190 Score = 183 bits (202), Expect = 7e-41 Identities = 459/690 (67%), Gaps = 13/690 (2%) Strand=Plus/Minus Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGG 110536 || ||| ||||||| || || || | | |||| || ||||||| |||||| | | Sbjct 449445 CCAACCTTATTTAATGCTGGTACCCCTAGCCCACAAATGTCTTCTTG-TTTCTTAGTTGC 449387 Query 110537 AATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTT 110595 || || ||||| || ||||| ||||| || || | ||| |||| |||| | |||| Sbjct 449386 TATGAAGGATGACTCCATTGACGGTATCTACGACAC-CTTGAAGACGTGTGCTTTGATTT 449328 Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655 | || | | || || |||||| | ||| |||| | ||||| || | || | | | Sbjct 449327 CCAAGAGTGCAGGTGGCATTGGTTTACACATTCACAACATTCGTTCCACTGGTACTTACA 449268 Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715 |||| | || ||| |||| | ||| | |||||||| | | || || ||| ||| Sbjct 449267 TCGCCGGTACCAACGGTACTTCTAATGGTATCATTCCAATGGTTCGTGTTTTTAACAACA 449208 Query 110716 CTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCG 110772 | || |||||| ||||||||||||| |||| ||| | |||||| | || | | Sbjct 449207 CCGCTCGTTATGTGGATCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTTTACTTGG 449148 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 ||||||||||| | |||||||| || ||| |||| | | || ||||| || |||| Sbjct 449147 AACCTTGGCATGCGGATATATTCGACTTCATAGATATCAGAAAGAATCACGGCAAAGAAG 449088 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || | ||||| | |||||||| || | |||||| | |||||||||||||| | | Sbjct 449087 AAAATAGAGCTAGAGATTTATTCCCGGCCTTATGGATTCCTGATTTATTCATGAAGAGAG 449028 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 || || |||| || ||| | | | | ||| | |||| ||| |||| |||| Sbjct 449027 TTGAACAAAACGGTGACTGGACATTATTCTCTCCAAACGAAGCTCCAGGTTTATCAGATG 448968 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCA 111012 | ||||| | || || ||||| | ||| ||||| ||||||||| || | | | Sbjct 448967 TCTATGGTGATGAATTCGAAGAATTATACTCCAAATACGAAAAAGAA---AACCGTGGTA 448911 Query 111013 AA---CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTG 111069 | ||| |||||| || | |||| | ||| | || ||||| |||||| | Sbjct 448910 GATCTGTTATTAAGGCTCAAAAATTATGGTACGCGATCTTGGATGCACAAACTGAAACCG 448851 Query 111070 GAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAG 111129 | ||||| | ||| || ||||| ||| | ||| || | ||||||| ||| |||| Sbjct 448850 GTACTCCATTTATGTTATATAAGGATGCTTGTAACAAGAAGACCAATCAAAAGAACTTAG 448791 Query 111130 GAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 | | || || || ||| ||||| |||| Sbjct 448790 GTATCATCAAATCATCTAACTTGTGTTGTG 448761 Score = 100 bits (110), Expect = 7e-16 Identities = 306/463 (66%), Gaps = 19/463 (4%) Strand=Plus/Minus Query 112986 AAACATGGAACTACAAACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTGCACAG 113045 ||||| || | | |||||| || | | || || ||||| || ||||| ||| | || Sbjct 448275 AAACACGGTATCAGAAACTCCTTATTAGTTGCTCCGATGCCAACTGCTTCCACTTCTCAA 448216 Query 113046 ATTCTCGGTAATAATGAATGTTTCGAGCCAATTACAAGT--AATATTTATGTCCGACGTG 113103 ||| | || || |||||||||||||| ||| |||| | |||||||| || | | Sbjct 448215 ATTTTAGGGAACAATGAATGTTTCGAACCA--TACACTTCAAATATTTACTCTAGAAGAG 448158 Query 113104 TTCTAGCAGGTGAGTTTGTACTTTGTAATAAATATCTGCAAGAAGAACTTCTCGGAATCG 113163 || | || ||||| ||| | || || ||| | | || | | | | | Sbjct 448157 TTTTGGCTGGTGAATTTCAAATTGTCAACCCATACTTATTACGTGATTTGGTGGATTTAG 448098 Query 113164 GTAAATGGAACAATGAAGTGAAAAACTCCATTATTGCTAATCAAGGTTCGGTTCAAC--- 113220 ||| |||||| |||| |||| ||| |||||| | || | ||||| ||||| Sbjct 448097 GTATCTGGAACGATGATATGAAGAACAACATTATCTCCAACAACGGTTCTATTCAAACCT 448038 Query 113221 -ATCTAAAATTGCCTGATTGCGTGAAAGATGTATTTAAGACTATTTGGGAAATTAAGCAA 113279 | |||| ||| || ||| |||||| ||| |||||| ||||||||||| ||| Sbjct 448037 TACCTAACATTCCC-GATGAATTGAAAGCCTTATATAAGACCGTTTGGGAAATTTCTCAA 447979 Query 113280 CGTGTCGTAATTGATATGGCTGCAGAT--CGTGGCAAGTTTATCGATCAATCTCAGTCGA 113337 | || ||||||||||| ||| | |||| || || |||||||| || ||| Sbjct 447978 AAGCATATTATCGATATGGCTGCTGATAGAGCGGCA--TTCATTGATCAATCACAATCGT 447921 Query 113338 TGAACTTATT--TATGCCGGACACCTCACCAGATAAGGTGACATCTGCTCTATTT-TACG 113394 | || |||| || |||| | || | |||| |||| || | | |||| || | Sbjct 447920 TAAA--TATTCACATTAAGGACCCAACAATGGGTAAGTTGACCTC-GATGCATTTCTATG 447864 Query 113395 GCTGGAAAAAAGGTTTAAAAACAGGTATGTATTATTTGCGAAC 113437 | ||||| || |||||||| || |||||||| |||||| |||| Sbjct 447863 GTTGGAAGAAGGGTTTAAAGACGGGTATGTACTATTTGAGAAC 447821 >seq112 Length=286159 Score = 96.9 bits (106), Expect = 8e-15 Identities = 156/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 279873 TGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGG 279932 |||||||||| |||||| || ||||| | | | ||||||| |||||||| || Sbjct 71365 TGGATGGTTTTAAACCTGGTCAACGTAAAGTCCTTTATGGTTGTTTTAAAAGAAACTTAA 71424 Query 279933 TAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATC 279992 | |||||| || ||| || |||||||||||||||||| || | || ||||||| Sbjct 71425 AATCTGAAATTAAGGTCAATCAATTGGCAGGTTATGTTTCAGAAAATACTGGGTATCATC 71484 Query 279993 ACGGTGAAGCGTCT---CTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTT 280049 | || ||| ||| ||||| ||||| | ||| | || ||| |||| || | || Sbjct 71485 ATGGCGAACAATCTTTAGTTCAA---ACTATTATTGGTTTAGCACAAAATTTCATTGGTT 71541 Query 280050 CAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTC 280092 | || || |||||| | ||| || |||||| |||||||| Sbjct 71542 CGAATAATTTAAATATACTTAAGCCTAATGGTTCTTTTGGTTC 71584 >seq66 Length=254592 Score = 95.1 bits (104), Expect = 3e-14 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | || || || ||||| || |||||| | ||||||| | | ||| | | | || Sbjct 137797 GTTTTATTTAACAGACAACCCTCTTTGCATAGATTGTCTATATTATCGCATTATG-CGAA 137855 Query 305390 GTATTATC---TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCG 305446 | |||| |||| ||||| || | |||| | ||| |||||| ||||||||||| Sbjct 137856 G-ATTAGACCGTGGAGA-ACATTCCGTCTTAATGAATGTGTTTGTACTCCTTATAATGCT 137913 Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||||| |||||||||||||||||||| ||||| |||||| Sbjct 137914 GATTTCGATGGAGATGAAATGAATATCCATGTTCCTCAA 137952 >seq105 Length=815575 Score = 87.8 bits (96), Expect = 4e-12 Identities = 157/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| || |||| ||| | || || | ||||| || | ||||| ||||| Sbjct 68837 CATTTGATGGATGATGACCCAGTTTTATTTAACCGTCAACCTTCGTTACATAAGATGTCC 68896 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTA--AG 305424 |||||||| |||| ||| ||||| ||| | ||| |||| ||||||| || || Sbjct 68897 ATGATGGCCCATAGAGTAAAAGT--TATGCCATATTCTACTTTCAGATTAAACTTATCAG 68954 Query 305425 TGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 | | | | || |||||||| ||||| ||||| |||||||||||| | ||||| || || Sbjct 68955 T-CACCT-CTCCATATAATGCAGATTTCGATGGGGATGAAATGAATTTACATGTTCCACA 69012 Query 305485 ATCAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526 ||| | | || | | | || || ||| |||||||| |||| Sbjct 69013 ATCGCAAGAAACCAGGGCAGAGTTGTCACAAATATGTGCTGT 69054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809865234473