Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq141 125 5e-24 seq101 93.3 3e-14 >seq141 Length=295507 Score = 125 bits (138), Expect = 5e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| ||||| | ||| ||||| |||| ||| || ||||| || |||||||| || Sbjct 197332 ACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGA 197391 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || ||||| || ||||||||||| || | ||| |||||| |||| Sbjct 197392 TAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGG 197451 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | || | ||| | |||||| ||| || | Sbjct 197452 AATACCTTCCTTGTCTTGAATCTT-GGACTTGACGTTGTCAATGGTGTCTGATGACTCAA 197510 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 | || | || || || ||||||||||| ||||| || ||||| |||||| || Sbjct 197511 CTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATTT 197563 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| ||||| | ||| ||||| |||| ||| || ||||| || |||||||| || Sbjct 197104 ACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGA 197163 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || ||||| || ||||||||||| || | ||| |||||| |||| Sbjct 197164 TAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGG 197223 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | || | ||| | |||||| ||| || | Sbjct 197224 AATACCTTCCTTGTCTTGAATCTT-GGACTTGACGTTGTCAATGGTGTCTGATGACTCAA 197282 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || |||||||| || || || || || || |||||| Sbjct 197283 CTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCATA 197332 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||| ||||| |||| ||| || ||||| || |||||||| || Sbjct 196876 ACCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGA 196935 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || ||||| || ||||||||||| || | ||| || ||| | || Sbjct 196936 TAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGG 196995 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | || | ||| | |||||| ||| || | Sbjct 196996 AATACCTTCCTTGTCTTGAATCTT-GGACTTGACGTTGTCAATGGTGTCTGATGACTCAA 197054 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || |||||||| || || || || || || |||||| Sbjct 197055 CTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCATA 197104 >seq101 Length=125820 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| || | ||| ||||| |||| |||| || ||||| ||||||||||| | Sbjct 105245 CACCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAG 105304 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || || ||||| || || || || || || | || ||||| | | Sbjct 105305 ATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTG 105364 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||||||| || || | | |||| ||| | |||||| ||||| Sbjct 105365 GAATACCTTCTTTGTCTTGGATCTT-AGACTTGACATTGTCAATGGTGTCCGAAGATTCA 105423 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| ||||| || || || || || ||||| Sbjct 105424 ACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703226826560