Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq141 104 2e-17
>seq141
Length=295507
Score = 104 bits (114), Expect = 2e-17
Identities = 169/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 25162 TCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGA 25221
|||| ||| || |||||| | || || ||||||||||| || || | || || | ||
Sbjct 197572 TCAAATAATAAATATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGA 197513
Query 25222 AGTCGAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTA 25280
||| || | || | || || || || | || || || ||| || || || ||||
Sbjct 197512 AGTTGA-GTCATCAGACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTA 197454
Query 25281 TACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATG 25340
| ||||| ||||| || ||| | |||| | ||| || ||| | ||||||| ||||
Sbjct 197453 TTCCGCCAGATCAACAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACAT 197394
Query 25341 TCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAG 25400
| ||||||||||| ||||| |||||||| | || || || ||||||||||| || |
Sbjct 197393 TATCTGATTACAATATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTG 197334
Query 25401 G 25401
|
Sbjct 197333 G 197333
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327
|| || || ||||| ||||| ||||| || ||| | |||| | ||| || ||| | |||
Sbjct 197238 GACAAGGAAGGTATTCCGCCAGATCAACAGAGATTAATTTTTGCCGGTAAGCAATTAGAA 197179
Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387
|||| |||| | ||||||||||| ||||| |||||||| | || || || |||
Sbjct 197178 GATGGCAGAACATTATCTGATTACAATATCCAAAAGGAATCCACATTACACTTGGTCTTA 197119
Query 25388 AGATTGAGAGGAGG 25401
|||||||| || ||
Sbjct 197118 AGATTGAGGGGTGG 197105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093326209760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |