Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq103 210 2e-49 >seq103 Length=904190 Score = 210 bits (232), Expect = 2e-49 Identities = 407/592 (69%), Gaps = 18/592 (3%) Strand=Plus/Minus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| ||||| | || || || || |||||||||||||| ||||| | ||||| || | Sbjct 562241 TGTTCCCAATCAAGTACCACGAAATTTGGCAAATGTACAAGAAAGCCGAAGCGTCCTTCT 562182 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAA--AACC 43824 |||| || |||||| | || ||| ||| || | | | |||| | | | ||| Sbjct 562181 GGACCGCCGAAGAAATCGACTTGGGTAAGGATACACAAGACTGGAACGAAAAATTGAACA 562122 Query 43825 ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883 |||| |||| | | || || || | ||||||||||||||||| ||||| || | Sbjct 562121 ACAATGAAAGATACTTCATTTCCAGAATCTTGGCGTTTTTTGCTGCTTCTGACGGTATTG 562062 Query 43884 TCAATGAAAATTTGGTT---AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 |||| ||||| |||||| | | | ||| ||||| ||| |||||||| | Sbjct 562061 TCAACGAAAACTTGGTTGAAAATTTCTCTGCT---GAAGTCCAAACCCCAGAAGCCAAGT 562005 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| ||||| || ||||| || ||||| ||||| || || | ||| | || | Sbjct 562004 GTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCTGAGACTTACTCGTTACTTA 561945 Query 44001 TAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGA-AA 44057 | || || |||||||||||| || ||||| || || |||||||| || || || Sbjct 561944 TCGACACTTACATCAAAGATC--CAAAGGAAGCCGATTTCTTATTTAATGCTATCGATAA 561887 Query 44058 CAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATT 44117 || | | || || || | || || |||||||| | | |||||| || | || Sbjct 561886 CATTCCTTGT-ATCAAGAAGAAGGCCGACTGGGCTTTAAGATGGATCAACGACGACGACG 561828 Query 44118 CTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGAT 44174 |||| ||| ||| || | || || || || | ||| ||||| || ||||| || | Sbjct 561827 CTTTATTTGGTGAAAGATTAGTTGCTTTCGCTGCTGTCGAAGGTATCTTCTTCAGTGGTT 561768 Query 44175 CGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAA 44234 ||||||| |||| || ||||| ||||| |||||||||||||||| || || || || | Sbjct 561767 CGTTTGCCTCCATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTTTAACCTTCTCTA 561708 Query 44235 ATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 | || || ||| ||||||| ||||| ||||| |||||||| || || || Sbjct 561707 ACGAATTGATATGTCGTGACGAAGGTTTACACACTGATTTTGCGTGTTTATT 561656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455065108965