Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq103 104 2e-17
seq141 100 2e-16
>seq103
Length=904190
Score = 104 bits (114), Expect = 2e-17
Identities = 370/574 (64%), Gaps = 21/574 (4%)
Strand=Plus/Plus
Query 130538 ATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATG 130597
|| || | |||||| ||||||||||| || || | || || |||||||| |||| ||
Sbjct 447914 ATATTTAACGATTGTGATTGATCAATGAATGCCGCTCTATCAGCAGCCATATCGATAATA 447973
Query 130598 GTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGC 130657
|| | || |||||| ||||||| |||| | | | | | ||| |||
Sbjct 447974 TGCTTTTGAGAAATTTCCCAAACGGTCTTATATAAGGCTTTCAATTCATCGGGAATGTTA 448033
Query 130658 GCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC 130717
| | | ||||| ||||||||||| ||||| | ||| |||| | ||||| |
Sbjct 448034 GGTAAGGTTTGAATAGAACCGTTGTTGGAGATAATGTTGTTCTTCATA---TCATCGTTC 448090
Query 130718 AAT---CCAAGCTGTACAAGATCTTTTACCAAATGATTAT----TAATGATTTGAAAATC 130770
| || | | || | ||| || ||| | ||| | | |||||||| ||
Sbjct 448091 CAGATACCTAAATCCACCAAATC----ACGTAATAAGTATGGGTTGACAATTTGAAATTC 448146
Query 130771 ACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTT 130830
|||||||| || | |||| |||||| || ||| | ||||| || |||| |||||
Sbjct 448147 ACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGGTTCGAAACATTCATTGTT 448206
Query 130831 GCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAG 130890
|| || ||||| | || | || || ||||| || ||||||| || || | |
Sbjct 448207 CCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAACTAATAAGGAGTTTCTGAT 448266
Query 130891 ACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGAC 130950
|||||| | | | ||| ||||||| |||||| ||||||| | || ||| |
Sbjct 448267 ACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCATA---ATTCAG--TTGGC 448321
Query 130951 ATTGTT--CCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGAACGAT 131008
|| || ||||| |||||||||| | || ||| || ||| ||| | | |
Sbjct 448322 TTTCTTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGAGAACCTTCATATGTT 448381
Query 131009 TCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATG 131068
| ||| ||||||| ||||| || || ||||||| ||| |||| ||||||
Sbjct 448382 TGGTACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACAGCACCGTGGTAAATG 448441
Query 131069 GTTTCGGCAATTTGTTTATTTAATTGTTTCGCTT 131102
||||| |||||| | ||||||| ||| ||||
Sbjct 448442 GTTTCAAAAATTTGGGTGTTTAATTCTTTAGCTT 448475
Score = 104 bits (114), Expect = 2e-17
Identities = 171/246 (70%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 131608 TTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATC 131667
|||| | ||| | | || | ||| | ||||| |||||||||| |||||| || |||||
Sbjct 448987 TTCGTTTGGAGAGAATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAATAAATC 449046
Query 131668 CGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttt 131727
|| | |||||| || || | |||||||||| | || |||||| | || | | ||
Sbjct 449047 AGGAATCCATAAGGCCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTT 449106
Query 131728 tttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC 131787
| | | || || ||||| || || ||||||||||| |||||||| || | || | ||
Sbjct 449107 TCTGATATCTATGAAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGC 449166
Query 131788 GCC---TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAA 131844
|| | | ||||| ||||||| |||| |||| | ||||||| | || || |
Sbjct 449167 ACCAGGTCTCTTGTTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAAC 449226
Query 131845 CATGGG 131850
||| ||
Sbjct 449227 CATTGG 449232
>seq141
Length=295507
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTC 27094
|| ||||| ||||| || || || ||||| |||||||| || | | ||||| || | ||
Sbjct 197348 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGC-CATC 197406
Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154
||| | || |||||||| |||| | | ||||||||| ||||| | ||| || || ||
Sbjct 197407 TTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTC 197466
Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214
|||||| || | | | || | ||||||| | |||||||||| || || |
Sbjct 197467 TTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGT 197526
Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || | ||||| || ||||||||||||
Sbjct 197527 CTTACCTGTTAATGTTTTAACGAAGATTTGCATA 197560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933400474616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |