Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq103 237 2e-57 >seq103 Length=904190 Score = 237 bits (262), Expect = 2e-57 Identities = 927/1444 (64%), Gaps = 35/1444 (2%) Strand=Plus/Plus Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||||||||| ||| ||||| || | |||||| ||| || |||| |||||||| Sbjct 448129 GTTGACAATTTGAAATTCACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTATGG 448188 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 ||| || |||||||| || || || ||||| | ||||| || |||||||| || || | Sbjct 448189 TTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGCAAC 448248 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG-- 110845 || | ||| | | ||| | | | | || ||| | | ||||||||| Sbjct 448249 TAATAAGGAGTTTCTGATACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATCCCAGTCCCA 448308 Query 110846 TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGA 110905 || || || | | |||| |||||||| |||||| || | || || | || || ||| Sbjct 448309 TAATTCAGTTGGCTTTCT--TTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTGGA 448366 Query 110906 GAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 110965 ||||| ||| | |||| || | |||| | ||||||||||||| | || |||| Sbjct 448367 GAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCACA 448426 Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025 | |||| || ||||||||||| || | | || | || || ||||| | || ||| Sbjct 448427 GCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGTCA 448486 Query 111026 AATGCGTAGCGGCACAA---AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082 |||| ||| | ||| ||||| |||| || | |||||||||||| || |||| Sbjct 448487 AATG-GTA--ATCTCAATGCCATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATT 448543 Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAAT 111141 ||||||| || ||| || || || | || ||| ||| || || | || | ||| || Sbjct 448544 GGTCTGTTTCTCATGTTCGAGTTCCTAGC-TTCTGGAACTGGGTAGTAGTTACGGTCGAT 448602 Query 111142 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT---- 111197 | || |||| || || |||| ||| || | |||||| | ||||| ||| Sbjct 448603 AATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCATGTAACTTTTCGAAATCGTA 448662 Query 111198 -CAA----AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 ||| | || | ||||||| | ||| | ||| | ||| || || ||||| || Sbjct 448663 CCAACTGGAGGTAC-TGTCTCTT--TCAACAAATGATGGTAAGGCAATAGAAGCCAAGTT 448719 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 |||||||| ||||| | | ||| || | ||| || ||| ||||| || Sbjct 448720 ACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCTCACAACACAAGTTAGATGA 448779 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || | || || |||||||| || |||||||||| || |||||||| || | ||| Sbjct 448780 TTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCATCCTTATATAACAT 448839 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTG 111431 | || || || || || || |||| | | || || | ||| || | | | || Sbjct 448840 AAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCT- 448898 Query 111432 GTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 111491 | || | | | || || ||||| || | ||| | |||| || || | Sbjct 448899 TAATAACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGTATAATTCTTCGAATTCAT 448958 Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551 |||| | || || | |||||| || | || |||| |||| | | ||| | ||| Sbjct 448959 CACCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGT 449018 Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 111611 || ||||| | ||||||||| | || |||||||| | || | || | ||||||| Sbjct 449019 TTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAG 449078 Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671 | | ||||| | || || || || | || | ||| || | |||||||| | Sbjct 449079 CTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGAATATATCCGCAT 449138 Query 111672 GCCATGGCTC------AAGATAGACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTA 111725 |||| || || |||| | || || || ||| | ||| |||||| | Sbjct 449139 GCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCTTGATCCA 449195 Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 111785 |||| || || ||| |||||| || |||| ||||||||| ||||||| || ||| | Sbjct 449196 CATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCATTAGAAGTACCGT 449255 Query 111786 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 111845 | || || || || | ||| | | | || ||||| | ||||| || | Sbjct 449256 TGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGTAAACCAATGCCAC 449315 Query 111846 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 111905 | || | ||| || || |||||| | | | || | |||||||||| || |||| Sbjct 449316 CTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGT 449375 Query 111906 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 111965 | ||||| | || | | ||| ||| ||||| || || || || ||||||||||| | Sbjct 449376 CATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAA 449435 Query 111966 AGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGA 112025 | | |||||| | |||| |||| | |||||||||| ||| ||| | || | || Sbjct 449436 ATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTTGTACGATTCGACGA 449495 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGG 112085 | || || || || ||||| || || | || || | ||| | || | ||||| Sbjct 449496 CTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAATCAAATGTTGTGGTC 449555 Query 112086 TTTC 112089 |||| Sbjct 449556 TTTC 449559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030484872800