Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq103 239 6e-58 >seq103 Length=904190 Score = 239 bits (264), Expect = 6e-58 Identities = 940/1461 (64%), Gaps = 27/1461 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | |||||||| || || || |||||||| || || ||||| | ||||| Sbjct 448169 TAAATATTTGAAGTGTATGGTTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAA 448228 Query 118242 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTT 118299 || || ||||| || || | | | |||| ||| | || ||| | ||| | || | || Sbjct 448229 GCAGTTGGCATCGGAGCAACTAATAAGGA-GTTTCTGATACCGTGTTTGGCCAA-GTTTT 448286 Query 118300 CCTTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 ||| | || |||||||| || || || ||| || | | ||||| ||||| || Sbjct 448287 GCTTCAAAGTATCCCAGTCCCATAATTCAG--TTGGCTTTCTTTCCCACAAGTCAAATTG 448344 Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417 | || ||| | || ||||| || || ||| |||| | || ||||| || | || || Sbjct 448345 TAAGACACCCTTAGATGCTGGAGAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGC 448404 Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477 |||||| | || || | || |||| || || ||||||||||| | | || | Sbjct 448405 CAATTCAATGGATGCTTCCACAGCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAA 448464 Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537 | | || || || | || ||||| | | || | ||||| |||| || | ||| Sbjct 448465 TTCTTTAGCTTCTTGAGAGTCAAATGGTAATCTCAATGCCATAAAAGCATCGGCTAAACC 448524 Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGG 118596 ||| ||||| | | ||||||| | | |||||| || || |||| ||| ||| | | | Sbjct 448525 TTGAACACCTAAGGCAATTGGTCTGTTTCTCATGTTCGAGTTCCTAGCT-TCTGGAACTG 448583 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 | || | || | ||||||| ||||||| || || |||||||| || | ||||| Sbjct 448584 GGTAGTAGTTACGGTCGATAATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCAT 448643 Query 118657 GAAGCTTTTCGTAATCAAA---ACTGCGAG------TCTCTTCATTGACATACTTAGGAA 118707 | | ||||||| |||| | |||| ||| |||||| | ||| | || | Sbjct 448644 GTAACTTTTCGAAATCGTACCAACTG-GAGGTACTGTCTCTT--TCAACAAATGATGGTA 448700 Query 118708 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 ||| || || |||| ||||| |||| ||||| ||| ||| || | ||| | Sbjct 448701 AGGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCT 448760 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | |||||||| || || ||| | || |||||||||||||| | ||| |||||| Sbjct 448761 CACAACACAAGTTAGATGATTTGATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTAC 448820 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 | |||||||| || | ||| |||| || || || || ||||| | | | || || | Sbjct 448821 AAGCATCCTTATATAACATAAATGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGT 448880 Query 118888 TCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGT 118947 ||| | | ||| | | | | | || |||| ||||| || | || Sbjct 448881 ACCATAATTTTTGAGCCTTAATAACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGT 448940 Query 118948 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 119007 | | |||| || || ||||| | | ||||| | ||||| || | | ||| ||| Sbjct 448941 ATAATTCTTCGAATTCATCACCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGA 449000 Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 | | | ||| | ||| | ||||| | ||||||||| | || || ||||| | | Sbjct 449001 ATAATGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGG 449060 Query 119068 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 ||| ||| | ||| | | | | |||||| | || ||||| | | || | | Sbjct 449061 CCGGGAATAAATCTCTAGCTCTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGA 449120 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG- 119185 |||| | |||||||| ||||| ||||||| ||| | || | | ||| | | Sbjct 449121 AGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGT 449180 Query 119186 -ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATAC 119244 |||| | || | ||||| | || ||| |||||| ||||||| |||||||||||||| Sbjct 449181 TACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATAC 449240 Query 119245 CATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGT 119304 ||| || || || || || || || | ||| | | | ||| |||| Sbjct 449241 CATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGT 449300 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 | | |||||| || ||||| | ||| || || || ||| | | | || |||||| Sbjct 449301 GTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGA 449360 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424 | || || || |||||| |||| | || | | ||| || |||||||| || || | Sbjct 449361 TACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAG 449420 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484 | |||||||| || || | ||||| | ||||| |||| | |||||||||| ||| Sbjct 449421 GGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGT 449480 Query 119485 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 119544 ||| | || | ||| || || || ||||| ||||| | | || | ||||| Sbjct 449481 TGTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAA 449540 Query 119545 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCTCC 119603 || | ||| ||| |||| | |||| | || ||| | |||| |||| ||| Sbjct 449541 TCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTCTCAACAAGTAAGATCTT-TCC 449599 Query 119604 AAGGTCTTGAGACCAAAATAG 119624 || ||||||| || || ||| Sbjct 449600 AAAGTCTTGAATCCGAAGTAG 449620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433708025080