Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq103 113 5e-20
>seq103
Length=904190
Score = 113 bits (124), Expect = 5e-20
Identities = 336/516 (65%), Gaps = 2/516 (0%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||| |||| || || || || || || ||||| || | ||||| ||| | ||| ||
Sbjct 449538 ATGAGAGTTGCTGTTGGTATACACGGTGACGATATCGAGAGAGTCGTCGAATCGTACAAC 449479
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
||||| ||| | | |||||| |||| |||| ||| | || || || |||||
Sbjct 449478 ATGATGTCCCAAAGATACTTCACCCACGGTTCGCCAACCTTATTTAATGCTGGTACCCCT 449419
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
| ||| || ||||| |||||| |||| ||||||||||||||| |||||| || |||
Sbjct 449418 AGCCCACAAATGTCTTCTTGTTTCTTAGTTGCTATGAAGGATGACTCCATTGACGGTATC 449359
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
||||| || | ||| ||| || || |||||| | | || || || || | |||
Sbjct 449358 TACGACACCTTGAAGACGTGTGCTTTGATTTCCAAGAGTGCAGGTGGCATTGGTTTACAC 449299
Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416
| | | || || || || | |||||| ||| || || ||||| | | ||
Sbjct 449298 ATTCAC-AACATTCGTTCCACTGGTACTTACATCGCCGGTACCAACGGTACTTCTAATGG 449240
Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476
|||| | |||||| | || || || |||||||| || | || || | || || ||
Sbjct 449239 TATCATTCCAATGGTTCGTGTTTTTAACAACACCGCTCGTTATGTGGATCAAGGTGGTAA 449180
Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536
||| | || | || || | ||| | || || ||||| ||||| | | || ||
Sbjct 449179 CAAGAGACCTGGTGCCTTTGCTCTTTACTTGGAACCTTGGCATGCGGATATATTCGACTT 449120
Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596
| | || | | ||| || || | || || | | | | || | ||| ||||
Sbjct 449119 CATAGATATCAGAAAGAATCACGGCAAAGAAGAAAATAGAGCTAGAGATTTATTCCCGGC 449060
Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGA 19632
||| |||||||| || |||||||| ||| |||||
Sbjct 449059 CTTATGGATTCCTGATTTATTCATGAAGAGAGTTGA 449024
Score = 105 bits (116), Expect = 7e-18
Identities = 277/420 (66%), Gaps = 2/420 (0%)
Strand=Plus/Plus
Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527
||||| | || || || ||||| || |||| || | || || | ||| | ||||
Sbjct 449120 AAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTG 449179
Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587
|| || || | || || || || |||||||| ||||| || | ||| || | |||
Sbjct 449180 TTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATA 449239
Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA- 79646
|| | | ||||| || ||| ||| ||||| | | |||||||| | | |
Sbjct 449240 CCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTT-GTGAAT 449298
Query 79647 GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTA 79706
||| | || ||||| || | | |||||| || || ||| ||| | || |||||
Sbjct 449299 GTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTA 449358
Query 79707 GATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTT 79766
||| || || || ||||| ||||||||||| || | ||| || ||||| |||||| |
Sbjct 449359 GATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCT 449418
Query 79767 GTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAG 79826
||||| || || || | ||| |||| |||| |||||| | ||||| |||||
Sbjct 449419 AGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCAT 449478
Query 79827 ATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
| ||||| || ||| | | || ||||| ||||| || || || || || | |||
Sbjct 449479 GTTGTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCAT 449538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523476683920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |