Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq103 113 5e-20 >seq103 Length=904190 Score = 113 bits (124), Expect = 5e-20 Identities = 336/516 (65%), Gaps = 2/516 (0%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||| |||| || || || || || || ||||| || | ||||| ||| | ||| || Sbjct 449538 ATGAGAGTTGCTGTTGGTATACACGGTGACGATATCGAGAGAGTCGTCGAATCGTACAAC 449479 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 ||||| ||| | | |||||| |||| |||| ||| | || || || ||||| Sbjct 449478 ATGATGTCCCAAAGATACTTCACCCACGGTTCGCCAACCTTATTTAATGCTGGTACCCCT 449419 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | ||| || ||||| |||||| |||| ||||||||||||||| |||||| || ||| Sbjct 449418 AGCCCACAAATGTCTTCTTGTTTCTTAGTTGCTATGAAGGATGACTCCATTGACGGTATC 449359 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 ||||| || | ||| ||| || || |||||| | | || || || || | ||| Sbjct 449358 TACGACACCTTGAAGACGTGTGCTTTGATTTCCAAGAGTGCAGGTGGCATTGGTTTACAC 449299 Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | | | || || || || | |||||| ||| || || ||||| | | || Sbjct 449298 ATTCAC-AACATTCGTTCCACTGGTACTTACATCGCCGGTACCAACGGTACTTCTAATGG 449240 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 |||| | |||||| | || || || |||||||| || | || || | || || || Sbjct 449239 TATCATTCCAATGGTTCGTGTTTTTAACAACACCGCTCGTTATGTGGATCAAGGTGGTAA 449180 Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536 ||| | || | || || | ||| | || || ||||| ||||| | | || || Sbjct 449179 CAAGAGACCTGGTGCCTTTGCTCTTTACTTGGAACCTTGGCATGCGGATATATTCGACTT 449120 Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596 | | || | | ||| || || | || || | | | | || | ||| |||| Sbjct 449119 CATAGATATCAGAAAGAATCACGGCAAAGAAGAAAATAGAGCTAGAGATTTATTCCCGGC 449060 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 ||| |||||||| || |||||||| ||| ||||| Sbjct 449059 CTTATGGATTCCTGATTTATTCATGAAGAGAGTTGA 449024 Score = 105 bits (116), Expect = 7e-18 Identities = 277/420 (66%), Gaps = 2/420 (0%) Strand=Plus/Plus Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 ||||| | || || || ||||| || |||| || | || || | ||| | |||| Sbjct 449120 AAGTCGAATATATCCGCATGCCAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTG 449179 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587 || || || | || || || || |||||||| ||||| || | ||| || | ||| Sbjct 449180 TTACCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATA 449239 Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA- 79646 || | | ||||| || ||| ||| ||||| | | |||||||| | | | Sbjct 449240 CCATTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTT-GTGAAT 449298 Query 79647 GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTA 79706 ||| | || ||||| || | | |||||| || || ||| ||| | || ||||| Sbjct 449299 GTGTAAACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTA 449358 Query 79707 GATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTT 79766 ||| || || || ||||| ||||||||||| || | ||| || ||||| |||||| | Sbjct 449359 GATACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCT 449418 Query 79767 GTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAG 79826 ||||| || || || | ||| |||| |||| |||||| | ||||| ||||| Sbjct 449419 AGGGGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCAT 449478 Query 79827 ATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 | ||||| || ||| | | || ||||| ||||| || || || || || | ||| Sbjct 449479 GTTGTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCAT 449538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523476683920