Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq103 111 2e-19
>seq103
Length=904190
Score = 111 bits (122), Expect = 2e-19
Identities = 232/343 (68%), Gaps = 2/343 (1%)
Strand=Plus/Minus
Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269
||||| ||||||||||| | | | ||| || ||||| || | ||| |||||
Sbjct 449523 GGTATACACGGTGACGATATCGAGAGAGTCGTCGAATCGTACAACATGATGTCCCAAAGA 449464
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
||||| || |||| |||||||| | || || |||||||| | ||| || |||||
Sbjct 449463 TACTTCACCCACGGTTCGCCAACCTTATTTAATGCTGGTACCCCTAGCCCACAAATGTCT 449404
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||| | || || |||||||||||||| || ||||| |||||||| || | |||
Sbjct 449403 TCTTGTTTCTTAGTTGCTATGAAGGATGACTCCATTGACGGTATCTACGACACCTTGAAG 449344
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448
|||||| || |||||| | | ||||| || ||| | ||| | | | ||| | ||
Sbjct 449343 ACGTGTGCTTTGATTTCCAAGAGTGCAGGTGGCATTGGTTTACACATTCAC-AACATTCG 449285
Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508
| | | || || ||| || || ||||| | |||| ||| | || ||| |
Sbjct 449284 TTCCACTGGTACTTACATCGCCGGTACCAACGGTACTTCTAATGGTATCATTCCAATGGT 449225
Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| || || |||||||| || || || || | || ||||||
Sbjct 449224 TCGTGTTTTTAACAACACCGCTCGTTATGTGGATCAAGGTGGT 449182
Score = 91.5 bits (100), Expect = 2e-13
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803
||| || ||||| ||| | || ||| | | || || ||| ||||||| | | || |
Sbjct 448000 GACCGTTTGGGAAATTTCTCAAAAGCATATTATCGATATGGCTGCTGATAGAGCGGCATT 447941
Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863
||| || || || || || | || || ||| || | || || ||| |||||||
Sbjct 447940 CATTGATCAATCACAATCGTTAAATATTCACATTAAGGACCCAACAATGGGTAAGTTGAC 447881
Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918
||||||||| || || || ||||||||||| | |||||||||||||||||| ||
Sbjct 447880 CTCGATGCATTTCTATGGTTGGAAGAAGGGTTTAAAGACGGGTATGTACTATTTG 447826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214679841400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |