Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq103 111 2e-19 >seq103 Length=904190 Score = 111 bits (122), Expect = 2e-19 Identities = 232/343 (68%), Gaps = 2/343 (1%) Strand=Plus/Minus Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269 ||||| ||||||||||| | | | ||| || ||||| || | ||| ||||| Sbjct 449523 GGTATACACGGTGACGATATCGAGAGAGTCGTCGAATCGTACAACATGATGTCCCAAAGA 449464 Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || |||| |||||||| | || || |||||||| | ||| || ||||| Sbjct 449463 TACTTCACCCACGGTTCGCCAACCTTATTTAATGCTGGTACCCCTAGCCCACAAATGTCT 449404 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||| | || || |||||||||||||| || ||||| |||||||| || | ||| Sbjct 449403 TCTTGTTTCTTAGTTGCTATGAAGGATGACTCCATTGACGGTATCTACGACACCTTGAAG 449344 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 |||||| || |||||| | | ||||| || ||| | ||| | | | ||| | || Sbjct 449343 ACGTGTGCTTTGATTTCCAAGAGTGCAGGTGGCATTGGTTTACACATTCAC-AACATTCG 449285 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508 | | | || || ||| || || ||||| | |||| ||| | || ||| | Sbjct 449284 TTCCACTGGTACTTACATCGCCGGTACCAACGGTACTTCTAATGGTATCATTCCAATGGT 449225 Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || || || |||||||| || || || || | || |||||| Sbjct 449224 TCGTGTTTTTAACAACACCGCTCGTTATGTGGATCAAGGTGGT 449182 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 ||| || ||||| ||| | || ||| | | || || ||| ||||||| | | || | Sbjct 448000 GACCGTTTGGGAAATTTCTCAAAAGCATATTATCGATATGGCTGCTGATAGAGCGGCATT 447941 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||| || || || || || | || || ||| || | || || ||| ||||||| Sbjct 447940 CATTGATCAATCACAATCGTTAAATATTCACATTAAGGACCCAACAATGGGTAAGTTGAC 447881 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918 ||||||||| || || || ||||||||||| | |||||||||||||||||| || Sbjct 447880 CTCGATGCATTTCTATGGTTGGAAGAAGGGTTTAAAGACGGGTATGTACTATTTG 447826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214679841400