Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq141 140 4e-28 seq101 118 1e-21 seq103 109 6e-19 >seq141 Length=295507 Score = 140 bits (154), Expect = 4e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||| ||||| | || ||||||||| Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || ||||| |||||||| || ||||| |||||||| Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | |||||||||| ||||||||| | || |||| | || || | || || ||| Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 196924 Query 27586 GTCCAAAAGGAATCCAC 27602 |||||||||||||||| Sbjct 196923 ATCCAAAAGGAATCCAC 196907 Score = 134 bits (148), Expect = 2e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||| ||||| | || ||||||||| Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || ||||| |||||||| || ||||| ||||| || Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | |||||||||| ||||||||| | || |||| | || || | || || ||| Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197152 Query 27586 GTCCAAAAGGAATCCAC 27602 |||||||||||||||| Sbjct 197151 ATCCAAAAGGAATCCAC 197135 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || | || || ||||| ||||| | || ||||||||| Sbjct 197559 ATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197500 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || ||||| |||||||| || ||||| ||||| || Sbjct 197499 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197440 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | |||||||||| ||||||||| | || |||| | || || | || || ||| Sbjct 197439 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197380 Query 27586 GTCCAAAAGGAATCCAC 27602 |||||||||||||||| Sbjct 197379 ATCCAAAAGGAATCCAC 197363 >seq101 Length=125820 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || |||||||| | || || ||||| ||||| | || ||||| || Sbjct 105474 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 105415 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | ||| |||| || || ||||| || || ||||| || || || Sbjct 105414 GGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGATCA 105355 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | |||| || |||||||||||| | || |||| | | ||| || | || || || Sbjct 105354 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAA 105295 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||||||||||||| | || | ||||| Sbjct 105294 CATTCAAAAGGAATCCACTTTACACTTGGTCTT 105262 >seq103 Length=904190 Score = 109 bits (120), Expect = 6e-19 Identities = 243/362 (67%), Gaps = 2/362 (1%) Strand=Plus/Plus Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 ||||| || | || ||||| || || |||||| ||||| | ||| || ||||||||| Sbjct 449183 CCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCA 449242 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || |||||| ||||| |||| | || ||| || | ||| || || Sbjct 449243 TTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGT 449302 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || ||| |||||||||| | ||| |||||| ||||||| |||| ||| || || || Sbjct 449303 AA-ACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGAT 449361 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 || || ||| || | ||||| ||| |||||||| ||||| || ||||| Sbjct 449362 ACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGG 449421 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | || ||||| || | ||||| | |||| |||| || | | ||||||| || Sbjct 449422 GGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTT 449481 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737 || | ||| ||| | |||||||||||||| ||||| | ||| || | ||||| Sbjct 449482 GTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAAT 449541 Query 81738 CA 81739 || Sbjct 449542 CA 449543 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || | || ||||||||| |||||||| | ||||||||||| || || | ||| Sbjct 447815 GCCTGAGTTCTCAAATAGTACATACCCGTCTTTAAACCCTTCTTCCAACCATAGAAATGC 447874 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || || | | ||| | | ||| |||| || ||| || || | || || || ||| Sbjct 447875 ATCGAGGTCAACTTACCCATTGTTGGGTCCTTAATGTGAATATTTAACGATTGTGATTGA 447934 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211 ||||| ||| | | ||| || ||||| || ||||| |||||| | ||||||||| Sbjct 447935 TCAATGAATGCCGCTCTATCAGCAGCCATATCGATAATATGCTTTTGAGAAATTTCCCAA 447994 Query 80212 ACTGT 80216 || || Sbjct 447995 ACGGT 447999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309024126160