Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq141 140 4e-28
seq101 118 1e-21
seq103 109 6e-19
>seq141
Length=295507
Score = 140 bits (154), Expect = 4e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | || || ||||| ||||| | || |||||||||
Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || ||||| |||||||| || ||||| ||||||||
Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | |||||||||| ||||||||| | || |||| | || || | || || |||
Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 196924
Query 27586 GTCCAAAAGGAATCCAC 27602
||||||||||||||||
Sbjct 196923 ATCCAAAAGGAATCCAC 196907
Score = 134 bits (148), Expect = 2e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | || || ||||| ||||| | || |||||||||
Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || ||||| |||||||| || ||||| ||||| ||
Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | |||||||||| ||||||||| | || |||| | || || | || || |||
Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197152
Query 27586 GTCCAAAAGGAATCCAC 27602
||||||||||||||||
Sbjct 197151 ATCCAAAAGGAATCCAC 197135
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || | || || ||||| ||||| | || |||||||||
Sbjct 197559 ATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197500
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || ||||| |||||||| || ||||| ||||| ||
Sbjct 197499 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197440
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | |||||||||| ||||||||| | || |||| | || || | || || |||
Sbjct 197439 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197380
Query 27586 GTCCAAAAGGAATCCAC 27602
||||||||||||||||
Sbjct 197379 ATCCAAAAGGAATCCAC 197363
>seq101
Length=125820
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || |||||||| | || || ||||| ||||| | || ||||| ||
Sbjct 105474 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 105415
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | ||| |||| || || ||||| || || ||||| || || ||
Sbjct 105414 GGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGATCA 105355
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | |||| || |||||||||||| | || |||| | | ||| || | || || ||
Sbjct 105354 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAA 105295
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
| ||||||||||||||| | || | |||||
Sbjct 105294 CATTCAAAAGGAATCCACTTTACACTTGGTCTT 105262
>seq103
Length=904190
Score = 109 bits (120), Expect = 6e-19
Identities = 243/362 (67%), Gaps = 2/362 (1%)
Strand=Plus/Plus
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
||||| || | || ||||| || || |||||| ||||| | ||| || |||||||||
Sbjct 449183 CCACCTTGATCCACATAACGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCA 449242
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497
| || |||||| ||||| |||| | || ||| || | ||| || ||
Sbjct 449243 TTAGAAGTACCGTTGGTACCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGT 449302
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| ||| |||||||||| | ||| |||||| ||||||| |||| ||| || || ||
Sbjct 449303 AA-ACCAATGCCACCTGCACTCTTGGAAATCAAAGCACACGTCTTCAAGGTGTCGTAGAT 449361
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
|| || ||| || | ||||| ||| |||||||| ||||| || |||||
Sbjct 449362 ACCGTCAATGGAGTCATCCTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGG 449421
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| || ||||| || | ||||| | |||| |||| || | | ||||||| ||
Sbjct 449422 GGTACCAGCATTAAATAAGGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTT 449481
Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737
|| | ||| ||| | |||||||||||||| ||||| | ||| || | |||||
Sbjct 449482 GTACGATTCGACGACTCTCTCGATATCGTCACCGTGTATACCAACAGCAACTCTCATAAT 449541
Query 81738 CA 81739
||
Sbjct 449542 CA 449543
Score = 86.0 bits (94), Expect = 7e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || | || ||||||||| |||||||| | ||||||||||| || || | |||
Sbjct 447815 GCCTGAGTTCTCAAATAGTACATACCCGTCTTTAAACCCTTCTTCCAACCATAGAAATGC 447874
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| || | | ||| | | ||| |||| || ||| || || | || || || |||
Sbjct 447875 ATCGAGGTCAACTTACCCATTGTTGGGTCCTTAATGTGAATATTTAACGATTGTGATTGA 447934
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
||||| ||| | | ||| || ||||| || ||||| |||||| | |||||||||
Sbjct 447935 TCAATGAATGCCGCTCTATCAGCAGCCATATCGATAATATGCTTTTGAGAAATTTCCCAA 447994
Query 80212 ACTGT 80216
|| ||
Sbjct 447995 ACGGT 447999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309024126160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |