Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq141 113 3e-20 >seq141 Length=295507 Score = 113 bits (124), Expect = 3e-20 Identities = 162/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || ||||| || | ||| |||||||| || || ||||| || | ||||| | ||| Sbjct 197348 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 197407 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||| ||||||||||| ||||| | |||||| || ||||| | || ||||||||| Sbjct 197408 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCT 197467 Query 34615 GTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| || | || ||| | ||| |||||| ||| ||||| | ||| || || Sbjct 197468 -TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGT 197526 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTATGA 34719 ||||| ||||| ||||| || || || ||||| || ||| | ||| Sbjct 197527 CTTACCTGTTAATGTTTTAACGAAGATTTGCATATTTATTATTTGA 197572 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || ||||| || | ||| |||||||| || || ||||| || | ||||| | ||| Sbjct 196892 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 196951 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||| ||||||||||| ||||| | ||||||||| || || | || ||||||||| Sbjct 196952 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCT 197011 Query 34615 GTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| || | || ||| | ||| |||||| ||| ||||| | ||| || || Sbjct 197012 -TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGT 197070 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || ||||| ||||| Sbjct 197071 CTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || ||||| || | ||| |||||||| || || ||||| || | ||||| | ||| Sbjct 197120 AAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCT 197179 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||| ||||||||||| ||||| | |||||| || ||||| | || ||||||||| Sbjct 197180 TCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCT 197239 Query 34615 GTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| || | || ||| | ||| |||||| ||| ||||| | ||| || || Sbjct 197240 -TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGT 197298 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || ||||| ||||| Sbjct 197299 CTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728859696969