Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq101 140 3e-28 seq141 131 1e-25 >seq101 Length=125820 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| | || || ||| | ||||| | ||||| ||| | || Sbjct 105473 ATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCG 105414 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||||||||| || ||||| |||||| Sbjct 105413 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAA 105354 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | ||| || || ||||| ||||| || ||| | || ||||||||| Sbjct 105353 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAAC 105294 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||||||||| || || ||||| ||||| || Sbjct 105293 ATTCAAAAGGAATCCACTTTACACTTGGTCTT 105262 >seq141 Length=295507 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | ||||| | ||||| || | || Sbjct 197331 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197272 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||||||||| ||||| || || || |||||| Sbjct 197271 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197212 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | ||||| || ||||| ||||| | || | || |||||||| Sbjct 197211 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197152 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || ||||| ||||| || | ||| ||||||| || Sbjct 197151 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGGTAT 197102 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| | || || ||| | ||||| | ||||| || | || Sbjct 197559 ATGCAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197500 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||||||||| ||||| || || || |||||| Sbjct 197499 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAA 197440 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | ||||| || ||||| ||||| | || | || |||||||| Sbjct 197439 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 197380 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || ||||| ||||| || | ||| ||||||| || Sbjct 197379 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGGGGTGGTAT 197330 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | ||||| | ||||| || | || Sbjct 197103 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCA 197044 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||||||||| ||||| || ||||| || ||| Sbjct 197043 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 196984 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | ||||| || ||||| ||||| | || | || |||||||| Sbjct 196983 CAGAGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAAT 196924 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || ||||| ||||| || | ||| | ||||| Sbjct 196923 ATCCAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGAGGTGG 196877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917350759360