Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq141 111 4e-19
>seq141
Length=295507
Score = 111 bits (122), Expect = 4e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | ||||| || |||||||| || ||||| | | || || ||
Sbjct 196888 TCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCC 196947
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| || || || || | | |||||||| || |||| ||||||||
Sbjct 196948 ATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTT 197007
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || ||||| || |||||||| || ||||| || | || ||
Sbjct 197008 GTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAAT 197067
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 197068 GGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
Score = 105 bits (116), Expect = 2e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | ||||| || |||||||| || ||||| | | || || ||
Sbjct 197116 TCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCC 197175
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| || || || || | | ||||| || || |||| ||||||||
Sbjct 197176 ATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTT 197235
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || ||||| || |||||||| || ||||| || | || ||
Sbjct 197236 GTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAAT 197295
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 197296 GGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Score = 100 bits (110), Expect = 7e-16
Identities = 156/222 (70%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | ||||| || |||||||| || ||||| | | || || ||
Sbjct 197344 TCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCC 197403
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| || || || || | | ||||| || || |||| ||||||||
Sbjct 197404 ATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTT 197463
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || ||||| || |||||||| || ||||| || | || ||
Sbjct 197464 GTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAAT 197523
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTAT 211119
||||| || || | || || || || | ||||| |||||
Sbjct 197524 GGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATTTAT 197565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149133634445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |