Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq141 111 4e-19 >seq141 Length=295507 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| | ||||| || |||||||| || ||||| | | || || || Sbjct 196888 TCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCC 196947 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || || || || | | |||||||| || |||| |||||||| Sbjct 196948 ATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTT 197007 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || ||||| || |||||||| || ||||| || | || || Sbjct 197008 GTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAAT 197067 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| || || | ||||| Sbjct 197068 GGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| | ||||| || |||||||| || ||||| | | || || || Sbjct 197116 TCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCC 197175 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || || || || | | ||||| || || |||| |||||||| Sbjct 197176 ATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTT 197235 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || ||||| || |||||||| || ||||| || | || || Sbjct 197236 GTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAAT 197295 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| || || | ||||| Sbjct 197296 GGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Score = 100 bits (110), Expect = 7e-16 Identities = 156/222 (70%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| | ||||| || |||||||| || ||||| | | || || || Sbjct 197344 TCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCC 197403 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || || || || | | ||||| || || |||| |||||||| Sbjct 197404 ATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTT 197463 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || ||||| || |||||||| || ||||| || | || || Sbjct 197464 GTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAAT 197523 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTAT 211119 ||||| || || | || || || || | ||||| ||||| Sbjct 197524 GGTCTTACCTGTTAATGTTTTAACGAAGATTTGCATATTTAT 197565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149133634445