Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq103 295 6e-75 >seq103 Length=904190 Score = 295 bits (326), Expect = 6e-75 Identities = 600/881 (68%), Gaps = 10/881 (1%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || ||||| || |||| |||||||||||| || || || || |||| Sbjct 561362 ACACCAGCCTTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAA 561421 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAG 4366 ||||| |||||||| ||||| || || ||||| ||||||| | ||||| || | || Sbjct 561422 GAAATGTTTTCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCT-AG 561480 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 || || | |||| ||||| |||||||| | ||| || | ||| | | ||||| || Sbjct 561481 CGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCAT 561540 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAA-AACTCTTGTTCTATAGTTACGGCTT 4485 || | ||| | |||| |||| | |||| || || | ||| || || |||| Sbjct 561541 ACCTAATAAGGAGATTGGTAAAGCGTC-GACAAAGAATTCCTTTTCGATCTCAACAGCTT 561599 Query 4486 CTGTGATTATATCTTTTATTT-TATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 | || || || ||||| | || | | |||| | ||| ||| | |||||| Sbjct 561600 CAGTAATAAT-TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAAT 561658 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||||||||||||| || ||||||||||| | | |||| ||||||||| || ||| Sbjct 561659 AAACACGCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTT 561718 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||| ||||||||||| || | ||| || || | |||||| || ||| ||| Sbjct 561719 AAACCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAG 561778 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| || || || || || ||||||| || || | | | | ||| Sbjct 561779 AAGATACCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCG 561838 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 || |||||| |||| ||||||| || || ||||| | || ||||| | | ||||| Sbjct 561839 TTGATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCA 561898 Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844 |||||||| | ||| ||| |||| || |||||||| || |||| || Sbjct 561899 TTAAATAAGAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTAACGAGTAA 561958 Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904 | ||||| || || ||||| || || || || || || || || | ||||||| Sbjct 561959 GTCTCAGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGG 562018 Query 4905 ACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964 ||| ||||| | | || |||| || ||||||||||| || ||||||||| || Sbjct 562019 GTTTGGACTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCA 562078 Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT---TTC 5021 |||||||||||||| | || || ||||| ||| | || | |||| ||| Sbjct 562079 GCAAAAAACGCCAAGATTCTGGAAATGAAGTATCTTTCATTGTTGTTCAATTTTTCGTTC 562138 Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081 |||| | ||| ||| || || | |||||| | ||||| || |||||||| ||| Sbjct 562139 CAGTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCT 562198 Query 5082 TTTTTGTACATAGACCAAATATCAGGATAC-TGAATCGGAA 5121 || |||||||| |||||| || | ||| ||| | |||| Sbjct 562199 TTCTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAA 562239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048595499269