Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq103 295 6e-75
>seq103
Length=904190
Score = 295 bits (326), Expect = 6e-75
Identities = 600/881 (68%), Gaps = 10/881 (1%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| || ||||| || |||| |||||||||||| || || || || ||||
Sbjct 561362 ACACCAGCCTTCTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCTAAA 561421
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAG 4366
||||| |||||||| ||||| || || ||||| ||||||| | ||||| || | ||
Sbjct 561422 GAAATGTTTTCCATGAAATCGAATGGGTTAGTGACGTTGTAGACCTTTTTGTTACCT-AG 561480
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
|| || | |||| ||||| |||||||| | ||| || | ||| | | ||||| ||
Sbjct 561481 CGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAGTTACAGTTCAT 561540
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAA-AACTCTTGTTCTATAGTTACGGCTT 4485
|| | ||| | |||| |||| | |||| || || | ||| || || ||||
Sbjct 561541 ACCTAATAAGGAGATTGGTAAAGCGTC-GACAAAGAATTCCTTTTCGATCTCAACAGCTT 561599
Query 4486 CTGTGATTATATCTTTTATTT-TATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544
| || || || ||||| | || | | |||| | ||| ||| | ||||||
Sbjct 561600 CAGTAATAAT-TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAATGAGAGAACAAT 561658
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||||||||||||| || ||||||||||| | | |||| ||||||||| || |||
Sbjct 561659 AAACACGCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAGAAGGTT 561718
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
|| || ||||| ||||||||||| || | ||| || || | |||||| || ||| |||
Sbjct 561719 AAACCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCACTGAAG 561778
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724
|| || ||||| || || || || || ||||||| || || | | | | |||
Sbjct 561779 AAGATACCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCGTCGTCG 561838
Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784
|| |||||| |||| ||||||| || || ||||| | || ||||| | | |||||
Sbjct 561839 TTGATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCGATAGCA 561898
Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844
|||||||| | ||| ||| |||| || |||||||| || |||| ||
Sbjct 561899 TTAAATAAGAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGATAAGTAACGAGTAA 561958
Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904
| ||||| || || ||||| || || || || || || || || | |||||||
Sbjct 561959 GTCTCAGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCTGGG 562018
Query 4905 ACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964
||| ||||| | | || |||| || ||||||||||| || ||||||||| ||
Sbjct 562019 GTTTGGACTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCA 562078
Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT---TTC 5021
|||||||||||||| | || || ||||| ||| | || | |||| |||
Sbjct 562079 GCAAAAAACGCCAAGATTCTGGAAATGAAGTATCTTTCATTGTTGTTCAATTTTTCGTTC 562138
Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081
|||| | ||| ||| || || | |||||| | ||||| || |||||||| |||
Sbjct 562139 CAGTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCT 562198
Query 5082 TTTTTGTACATAGACCAAATATCAGGATAC-TGAATCGGAA 5121
|| |||||||| |||||| || | ||| ||| | ||||
Sbjct 562199 TTCTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAA 562239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048595499269
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |