Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq103 495 5e-135 seq138 167 3e-36 >seq103 Length=904190 Score = 495 bits (548), Expect = 5e-135 Identities = 1465/2228 (66%), Gaps = 57/2228 (3%) Strand=Plus/Plus Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879 |||||||||||| || |||| |||| |||| || ||||||||||| |||| || Sbjct 447829 ATAGTACATACCCGTCTTTAAACCCTTCTTCCAACCATAGAAATGCATCGAGGTCAACTT 447888 Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 | || || || |||||||| | ||| || |||||| ||||| || | Sbjct 447889 ACCCATTGTTGGGTCCTTAATGTGAATATTTAACGATTGTGATTGATCAATGAATGCCGC 447948 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 ||||||||| ||||| | ||||| |||||||| ||||||||||| || || | | Sbjct 447949 TCTATCAGCAGCCATATCGATAATATGCTTTTGAGAAATTTCCCAAACGGTCTTATATAA 448008 Query 77000 TTGTTTGATATCATCTGGAAGGTTTG-TAT--TTTGAATGGAACCACCATCTGATATAAT 77056 ||| | ||||| |||| ||| | || ||||||| ||||| | || ||||| Sbjct 448009 GGCTTTCAATTCATCGGGAATGTTAGGTAAGGTTTGAATAGAACCGTTGTTGGAGATAAT 448068 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTC--TCTGTTAAAACTC-TAAGGAGATG 77113 | ||||| |||||||| ||||| | | ||| || ||| | | ||| || | Sbjct 448069 GTTGTTCTTCATATCATCGTTCCAGA--TACCTAAATCCACCAAATCACGTAATAAG-TA 448125 Query 77114 AGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATA 77173 || || || ||||||||||| |||| ||| ||||| | || ||||||||| || || Sbjct 448126 TGGGTTGACAATTTGAAATTCACCAGCCAAAACTCTTCTAGAGTAAATATTTGAAGTGTA 448185 Query 77174 TGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGC 77233 |||||| | | |||||||||| || |||||||||| ||| |||||||||||||| || || Sbjct 448186 TGGTTCGAAACATTCATTGTTCCCTAAAATTTGAGAAGTGGAAGCAGTTGGCATCGGAGC 448245 Query 77234 CACCAATAAACTATTTCTGAGACCATGTGTT-CTGATTTTATCTTTTAGATATTTCCAAT 77292 || ||||| ||||||| ||| ||| | | | ||| ||| | ||| ||| | Sbjct 448246 AACTAATAAGGAGTTTCTGATACCGTGTTTGGCCAAGTTTTGCTTCAAAGTATC-CCAGT 448304 Query 77293 CCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCAT 77352 |||| | || | || ||||| | || |||||| | || ||| || Sbjct 448305 CCCATAATTCAGTTGGCTTTCTTTCCCACAAGTCAAATTGTAAGACACCCTTAGATGCTG 448364 Query 77353 ATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCA 77412 || || | |||||||| || || ||||| ||||||| | |||| ||||||| Sbjct 448365 GAGAACCTTCATATGTTTGGTACGGGCCTTCGATTTCAGCCAATTCAATGGATGCTTCCA 448424 Query 77413 ATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTAT 77472 || |||| ||||| ||||| ||||| | | || | |||| ||||| | | Sbjct 448425 CAGCACCGTGGTAAATGGTTTCAAAAATTTGGGTGTTTAATTCTTTAGCTTCTTGAGAGT 448484 Query 77473 CAAACGGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATA 77531 |||| || |||| | || | ||||| ||||| ||||| || ||||| || | |||| Sbjct 448485 CAAATGG-TAATCTCAATGCCATAAAAGCATCGGCTAAACCTTGAACACCTAAGGCAATT 448543 Query 77532 GGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATA 77591 ||||| | |||| | || || | |||||||||||| || || || ||| ||| ||| Sbjct 448544 GGTCTGTTTCTCATGTTCGAGTTCCTAGCTTCTGGAACTGGGTAGTAGTTACGGTCGATA 448603 Query 77592 ATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAG-TTTAAGAAA----AT 77646 ||| |||| | || | || || ||| || || | || ||| |||| | Sbjct 448604 ATTCTATTTAAGTTACGCGTCACAACCTTAGTAACTTCATGTAACTTTTCGAAATCGTAC 448663 Query 77647 CAAATC----TTCCATCTAT---AACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACA 77698 ||| | | | ||| | |||||| ||| | || || ||||| || | ||||| Sbjct 448664 CAACTGGAGGTACTGTCTCTTTCAACAAATGATGGT-AAGGCAATAGAAGCCAAGTTACA 448722 Query 77699 AACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTT 77758 ||| || || |||| || | |||| | ||||| ||| | ||| |||| Sbjct 448723 AACAGCAACTTCATCAGGCGCAGAGTATTCAACAATCTCACAACACAAGTTAGATGATTT 448782 Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| | || | || | ||| ||| |||| || || || | |||||||| | ||||| Sbjct 448783 GATGATACCTAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCATCCTTATATAACATAAA 448842 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT 77878 ||||| ||||||||| | |||| || | || | | ||| | | ||| || || Sbjct 448843 TGGAGTACCGGTTTCAGTTTGTGCATCCAAGATCGCGTACCATAATTTTTGAGCCTTAAT 448902 Query 77879 CATAGATTTGTATCGCCTCTCTCTTTCATATT--GAGTATATAGCCGTTCAAATTCATCT 77936 | |||| | || | ||| |||| |||| ||||||| | ||| |||||||| Sbjct 448903 AACAGATCTACCACGGTTTTCTTTTTCGTATTTGGAGTATAATTC--TTCGAATTCATCA 448960 Query 77937 CCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCT 77996 || | ||||| || || || ||| ||||| | | |||| ||||||||| | | Sbjct 448961 CCATAGACATCTGATAAACCTGGAGCTTCGTTTGGAGAGAATAATGTCCAGTCACCGTTT 449020 Query 77997 TCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 78056 | | ||||| ||||| || | |||||| ||||||| || |||| ||||| | | Sbjct 449021 TGTTCAACTCTCTTCATGAATAAATCAGGAATCCATAAGGCCGGGAATAAATCTCTAGCT 449080 Query 78057 CTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116 |||| |||||| || || ||||||| | | ||| | || || | ||||| | |||| Sbjct 449081 CTATTTTCTTCTTTGCCGTGATTCTTTCTGATATCTATGAAGTCGAATATATCCGCATGC 449140 Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176 || ||||| | || | || | | ||||||| || ||||| || ||||| | ||| Sbjct 449141 CAAGGTTCCAAGTAAAGAGCAAAGGCACCAGGTCTCTTGTTACCACCTTGATCCACATAA 449200 Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236 | |||||||| ||| |||| | | ||||||||| ||||| ||||| || || || || Sbjct 449201 CGAGCGGTGTTGTTAAAAACACGAACCATTGGAATGATACCATTAGAAGTACCGTTGGTA 449260 Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296 || | || ||| | ||| | | ||||| || |||| || || || || ||||| Sbjct 449261 CCGGCGATGTAAGTACCAGTGGAACGAATGTTGTGAATGTGTAAACCAATGCCACCTGCA 449320 Query 78297 ATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 |||| || || | ||| || ||| ||||| || ||||||||||| || || |||||| Sbjct 449321 CTCTTGGAAATCAAAGCACA-CGTCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCATC 449379 Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415 | |||| || | ||||| ||||||||| | | || || ||||||||||| Sbjct 449380 CTTCATAGCAACTAAGAAACAAGAAGACATTTGTGGGCTAGGGGTACCAGCATTAAATAA 449439 Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475 || || || | || || || || ||| || | | ||||| | ||| | || Sbjct 449440 GGTTGGCGAACCGTGGGTGAAGTATCTTTGGGACATCATGTTGTACGATTCGACGACTCT 449499 Query 78476 TTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTT 78534 || || || || | || || || || || || | ||| | || ||| || ||||||| Sbjct 449500 CTCGATATCGTCACCG-TGTATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTT 449558 Query 78535 CAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAAT 78594 | | |||| || ||| |||||||||| ||| |||||||||| || || || || | Sbjct 449559 CGGCAACCTTACCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAATCCGAAGT 449618 Query 78595 AGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCT---TTGTATT 78651 ||||||| ||| || | || | | ||| | | |||| | || || ||| Sbjct 449619 AGTTGTAATTAAAATCACGGTCAAATACAATTGCCG-----AGTTCAACTCGGGTGCATT 449673 Query 78652 TGGT--AACAATATC---CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTT 78706 | | | |||||| | || || || ||||| || || || | | || |||| Sbjct 449674 GGCTTGGATAATATCGAACGTGTCATTA---GAAATCATTGGCGAGTGCAACCCTGTTTT 449730 Query 78707 AGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTT 78766 || || || || | | |||| || | || | ||| | || | |||| ||| Sbjct 449731 TGGGTTCACGTATTCATATAACTCCCTACTGACTTGTGAAAACTGCTTGGTGGTTTGCTT 449790 Query 78767 GTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG--TTGT-GT 78823 ||| | |||||||| || || || ||||| | ||||| || |||||||| | || || Sbjct 449791 GTGCAAGTTAGATACCGCGATCCTGGCAGCCAAGATAGCGTAGTCAGGATGAATCGTAGT 449850 Query 78824 AGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATT 78883 || ||| ||||| | || || || || | || ||||| ||||| ||||||| | Sbjct 449851 CATATAAGCGGCTG---TCTCAGCTGCCAAGTTGTCCAACTCAATAGTGTTGACCCCTTG 449907 Query 78884 ATATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAA 78943 || | || ||||||| | | ||| ||| || || || || | | || Sbjct 449908 GTACACCCCAGAAATAACTCTTTGTGTGATAGCGACTGGTTCGACGTGTTCGGAATCTAA 449967 Query 78944 TCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCA 79003 ||||| ||||| || || | || ||||| || ||||| |||| |||||| | Sbjct 449968 CCCATAGCATAACCTTTGAACTCTAGCAGTGATCTTGTCAAAGCGAACAGGCTCCTTACG 450027 Query 79004 TCCATTTC 79011 ||||| || Sbjct 450028 TCCATCTC 450035 Score = 178 bits (196), Expect = 2e-39 Identities = 400/597 (67%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| |||||| ||||||||| || | |||||| || | || || ||||||||||| Sbjct 561653 AACAATAAACACGCAAAATCAGTGTGTAAACCTTCGTCACGACATATCAATTCGTTAGAG 561712 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || | ||| ||||| | || | || || | ||| || || | || || || ||| Sbjct 561713 AAGGTTAAACCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATGGAGGCAAACGAACCA 561772 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC---GTAACTGGCT 48308 ||||| || ||||| || || || || || | ||| || || || | | Sbjct 561773 CTGAAGAAGATACCTTCGACAGCAGCGAAAGCAACTAATCTTTCACCAAATAAAGCGTCG 561832 Query 48309 TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 |||| || ||||| | | ||||| || ||||||||||| | |||||| || | || Sbjct 561833 TCGTCGTTGATCCATCTTAAAGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGTTATCG 561892 Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428 ||||||||||| | || | ||| || |||||| | |||||| || | ||| | Sbjct 561893 ATAGCATTAAATAAGAAATCGGCTTCCTTTGGATCTTTGATGTAAGTGTCGA-TAAGTAA 561951 Query 48429 CTA-TACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGC 48487 | | || | || |||||||| ||||| || || || || || || ||||| | || Sbjct 561952 CGAGTAAGTCTCAGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGC 562011 Query 48488 TTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATC 48547 ||||| | | || || || | | | || |||| |||| || || || || || || || Sbjct 562012 TTCTGGGGTTTGGACTTCAGCAGAGAAATTTTCAACCAAGTTTTCGTTGACAATACCGTC 562071 Query 48548 ACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT 48607 | |||||||||||| || || | ||| || ||| |||| ||| ||| ||| Sbjct 562072 AGAAGCAGCAAAAAACGCCAAGATTCTGGAAATGAAGTATCTTTCATTGTTGTTCAATTT 562131 Query 48608 ---ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGC 48664 |||||||| | |||| || | || | |||||| || ||||| || || || Sbjct 562132 TTCGTTCCAGTCTTGTGTATCCTTACCCAAGTCGATTTCTTCGGCGGTCCAGAAGGACGC 562191 Query 48665 CTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || ||||| || ||||| | ||| || || ||| | ||||||||| | ||| || Sbjct 562192 TTCGGCTTTCTTGTACATTTGCCAAATTTCGTGGTACTTGATTGGGAACAAAACGAA 562248 >seq138 Length=177124 Score = 167 bits (184), Expect = 3e-36 Identities = 428/647 (66%), Gaps = 6/647 (1%) Strand=Plus/Plus Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011 ||||||||| | | || ||| | | | ||||| || ||||| || |||| | | Sbjct 79629 AATCCAGGGGAGTTATCTGGAGAAAATAGCGACCAATCTAAATCTTGTTTTACTCTCTCC 79688 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 ||||| | ||| |||||||||| || ||||| ||| |||| ||| |||||| || Sbjct 79689 ATAAATAAATCTGGTATCCATAATCCATAAAATAAATCACGGGCTCTCATTTCTTCTTTC 79748 Query 78072 CC-TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || || || | || ||| | | | ||| | ||||||| | ||||||||||| ||||| Sbjct 79749 CCGTGGTTTTTCTTCAAGTCCAATACACTGAA-AATATCACAGTGCCATGGTTCAAGATA 79807 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 ||| || | | |||| |||| ||| ||||| |||||||| | ||||| || || || || Sbjct 79808 TATCGCAAAAGCTCCTGGTCTTTTGTTACCACCCTGATCGACGTATCTCGCTGTATTGTT 79867 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 | ||||| | ||| |||| | ||| | ||||| ||||||| | ||| || || Sbjct 79868 GAAGACTCTTAGCATAGGAACTAAACCACTTGATGTACCATTTGAACTAGATATGTATGA 79927 Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310 |||||| | |||| ||| || || || ||||| || | || || |||| Sbjct 79928 GCCACTTCCACGAACGTTATGAACATGTAGTCCAATTCCCCCGGATGCTTTTGAAATTAA 79987 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 || | | ||||| | || ||||| ||||| ||||| |||| ||| | Sbjct 79988 GGCTGATTTATGTAATGTTTTATAAATACCATCTATTGAATCATCTTCCATGGCAAGTAA 80047 Query 78371 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 ||| || ||| | | | | ||||||| | |||||||||||| ||||| ||||| Sbjct 80048 AAAGCAAGAAGATAAATAGTTGTACTCAGTTCCAGAATTAAATAATGTAGGAGACGCATG 80107 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTG 78490 | || | || | || | | | ||||||||||| || || || | ||||| Sbjct 80108 AATGAAATACTTCTGCGACATCAATTCATATGTTTCAATCGCGCTGTCAATAT--CATTG 80165 Query 78491 --ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 || || |||| ||| || | | |||||| ||| || ||||| || ||||| Sbjct 80166 CCGTGGATGCCTAACGCCACTCTTAAGAACATAAACTGTGGAGTTTCACTGGTAGTATTA 80225 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 78595 | || ||| || || || || || | || || || | |||||||| Sbjct 80226 TCTAATTTTAATAAATAAGAATTCTGTAATGTCTTTATTCCAAAATA 80272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667124111520