Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq101 152 1e-31
seq141 147 5e-30
seq103 96.9 7e-15
>seq101
Length=125820
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||| ||||| |||||||| |||| | || | ||||| |||
Sbjct 105265 ACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCT 105324
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || || ||||| || | |||||| ||| |||||||| || |||||||||
Sbjct 105325 AATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 105384
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || |||||||||| ||| ||||| | || || ||||||
Sbjct 105385 ATCTTAGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCTAAGGTAATGGTCTTA 105444
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||||||
Sbjct 105445 CCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105476
>seq141
Length=295507
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||| |||||||| ||||| |||| | || | |||||| |||
Sbjct 196895 ACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCT 196954
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||| || || | |||||||| |||||||| |||||||||||
Sbjct 196955 AATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 197014
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || ||| | || || ||||| || | || ||||| | || || ||||||
Sbjct 197015 ATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTA 197074
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| || |||||
Sbjct 197075 CCTGTCAAAGTCTTGACGAAAATTTGCAT 197103
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||| |||||||| ||||| |||| | || | |||||| |||
Sbjct 197123 ACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCT 197182
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||| || || | ||||| || ||||||||| |||||||||||
Sbjct 197183 AATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGA 197242
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || ||| | || || ||||| || | || ||||| | || || ||||||
Sbjct 197243 ATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTA 197302
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| || |||||
Sbjct 197303 CCTGTCAAAGTCTTGACGAAAATTTGCAT 197331
Score = 140 bits (154), Expect = 7e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||| |||||||| ||||| |||| | || | |||||| |||
Sbjct 197351 ACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGATAATGTTCTGCCATCTTCT 197410
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||| || || | ||||| || ||||||||| |||||||||||
Sbjct 197411 AATTGCTTACCGGCAAAAATTAATCTCTGTTGATCTGGCGGAATACCTTCCTTGTCTTGA 197470
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || ||| | || || ||||| || | || ||||| | || || ||||||
Sbjct 197471 ATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACTTCTAAGGTAATGGTCTTA 197530
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105
|| || || || |||||||| || ||||| || ||
Sbjct 197531 CCTGTTAATGTTTTAACGAAGATTTGCATATTTAT 197565
>seq103
Length=904190
Score = 96.9 bits (106), Expect = 7e-15
Identities = 169/244 (69%), Gaps = 4/244 (2%)
Strand=Plus/Minus
Query 230169 ACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCC--TTGCCGTCTTA 230226
|| |||| |||| | |||||||| ||| || ||||||| | || | || | |||
Sbjct 561603 ACTGAAGCTGTTGAGATCGAAAAGGAATTCTTTGTCGACGCTTTACCAATCTCCTTATTA 561544
Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286
|| ||||| | | | ||| | |||||| | ||||| || |||||| | | || |
Sbjct 561543 --GGTATGAACTGTAACTTAATGTGTCAATATGTTGAATTTGTTGCTGATAGATTATTGG 561486
Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346
| |||||||| || | || || || ||| || ||||| |||| ||| ||||| ||
Sbjct 561485 TTGCGCTAGGTAACAAAAAGGTCTACAACGTCACTAACCCATTCGATTTCATGGAAAACA 561426
Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCG 230406
|||| | || || || ||||||||||||||| | ||||| ||||| || | | | |
Sbjct 561425 TTTCTTTAGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTCAGTGATTACCAGAAGGCTG 561366
Query 230407 GTGT 230410
||||
Sbjct 561365 GTGT 561362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046736611610222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |