Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq103 192 6e-44 >seq103 Length=904190 Score = 192 bits (212), Expect = 6e-44 Identities = 553/842 (66%), Gaps = 29/842 (3%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 ||||||| || || |||||||| |||| || || |||||||| ||||| ||||| |||| Sbjct 561393 TTTCGAAGAAGTTGGTCTTACCGGCTAAAGAAATGTTTTCCATGAAATCGAATGGGTTAG 561452 Query 23300 AAGTATTATATACAGCTTTACATGA--TAATTCCTTTAAAAGCCTATCTGCTACAAATTC 23357 || || || |||| | | || | || | ||||| || |||||||| Sbjct 561453 TGACGTTGTAGAC--CTTTTTGTTACCTAGCGCAACCAATAATCTATCAGCAACAAATTC 561510 Query 23358 AATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATA 23417 || |||||||||||| || | | |||| ||||||| || | ||| | || || Sbjct 561511 AACATATTGACACATTAAGTTACAGTTCATACCTAATAAGGAGATTGGTAAAGCGTCGAC 561570 Query 23418 TAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTTC 23474 |||||| ||||| || |||||| || |||| ||| | ||||||||| | || Sbjct 561571 AAAGAATTCCTTTTCGATCTCAACAGCTTCAGTAATAATTCTTTCAACAATAACAGCATC 561630 Query 23475 ACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTC 23534 ||| | || ||||| ||||||||||| ||||||||| |||| ||||| Sbjct 561631 T---GGTCTGTTTTGTAAATGAGAGAACAATAAACACGCAAAATCAGTGTGTAAACCTTC 561687 Query 23535 ATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAAT 23594 || | || |||||||| ||||| || ||||| || ||||| || |||| || || | Sbjct 561688 GTCACGACATATCAATTCGTTAGAGAAGGTTAAACCAGGCATCAAACCTCTCTTCTTCAA 561747 Query 23595 CCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 ||| || || | ||||| || || ||||| ||||| || ||||| || || || || Sbjct 561748 CCAGAAAATGGAGGCAAACGAACCACTGAAGAAGATACCTTCGACAGCAGCGAAAGCAAC 561807 Query 23655 AAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTT 23714 | | | ||||||| || | | || |||||| || | ||| | ||||| Sbjct 561808 TAATCTTTCACCAAATAAAGCGTCGTCGTCGTTGATCCATCTTAAAGCCCAGTCGGCCTT 561867 Query 23715 CAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT--- 23771 | || | ||| ||| | || || || || || | ||| | |||| || Sbjct 561868 CTTCTTGATACAAGGAATGTTATCGATAGCATTAAATAAGAAA---TCGGCTTCCTTTGG 561924 Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || || || || || ||||| || | ||||| ||||| ||||| || Sbjct 561925 ATCTTTGATGTAAGTGTCGATAAGTAACGAGTAAGTCTCAGAGTGAATGTTTTCCATCAT 561984 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 || || || ||||| ||||| | ||||| | ||| || ||| | | || ||| Sbjct 561985 GATTTGGAAACCATAGAAACACTTGGCTTCTGGGGTTTGGACTTCAGCAGAGAAATTTTC 562044 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTT-- 23949 | | || |||||||| |||||||| ||| ||||||||| || || | | ||| | Sbjct 562045 AACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAAAACGCCA----AGATTCTGG 562100 Query 23950 --ATAAAATGTCTTTCATCAGTTGAT-AATTTT---TTCCAATCATTAATATCTTTTGAT 24003 || || | |||||||| |||| | |||||| ||||| || | |||| || Sbjct 562101 AAATGAAGTATCTTTCAT-TGTTGTTCAATTTTTCGTTCCAGTCTTGTGTATCCTTACCC 562159 Query 24004 AAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATA 24063 || || | ||| || | ||||| || || ||| ||| |||||| ||||||| Sbjct 562160 AAGTCGATTTCTTCGGCGGTCCAGAAGGACGCTTCGGCTTTCTTGTACATTTGCCAAATT 562219 Query 24064 TC 24065 || Sbjct 562220 TC 562221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521486741910200