Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq141 98.7 7e-16 seq101 82.4 5e-11 >seq141 Length=295507 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || |||| ||| || |||| ||| | ||| ||||||||||| ||||| Sbjct 197098 TTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTA 197157 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | | | | || || | ||||| |||||||| || || | ||| ||||| Sbjct 197158 ATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATC 197217 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||||||| || ||||| ||| | | | |||||||| | || Sbjct 197218 TGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGA 197277 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 197278 CTCAACTTCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197331 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || |||| ||| || |||| ||| | ||| ||||||||||| ||||| Sbjct 197326 TTGCATACCACCCCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTA 197385 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | | | | || || | ||||| |||||||| || || | ||| ||||| Sbjct 197386 ATCAGATAATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGATC 197445 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||||||| || ||||| ||| | | | |||||||| | || Sbjct 197446 TGGCGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGA 197505 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || || | || || |||||||||||||| Sbjct 197506 CTCAACTTCTAAGGTAATGGTCTTACCTGTTAATGTTTTAACGAAGATTTGCAT 197559 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| ||| || |||| ||| | ||| ||||||||||| |||||||| | Sbjct 196877 CCACCTCTCAATCTTAAGACCAAGTGTAATGTGGATTCCTTTTGGATATTGTAATCAGAT 196936 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | | | | || || | ||||| |||||||| || || | ||| || |||| || Sbjct 196937 AATGTTCTGCCATCTTCTAATTGCTTACCGGCAAAAATTAATCTCTGTTGGTCTGGTGGA 196996 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||||||| || ||||| ||| | | | |||||||| | || || || Sbjct 196997 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGATGACTCAACT 197056 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 197057 TCTAAGGTAATGGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 197103 >seq101 Length=125820 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| | ||| || |||| ||| | ||| |||||||| ||||||||||| | Sbjct 105247 CCACCTCTTAATCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGAATGTTGTAATCAGAT 105306 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || || | ||||| || || ||||| || | || ||||| | | Sbjct 105307 AAGGTT--CTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTG 105364 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || || ||||| ||| || ||| | |||||||| | ||||| Sbjct 105365 GAATACCTTCTTTGTCTTGGATCTTAGACTTGACATTGT--CAATGGTGTCCGAAGATTC 105422 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 105423 AACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989553235081