Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq79 105 9e-18 seq103 89.7 7e-13 >seq79 Length=395449 Score = 105 bits (116), Expect = 9e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 50741 TGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGAT 50800 ||||||||||||||| ||||| || || | || || || || ||||| ||| | |||| Sbjct 378777 TGATATGGGTTTAGGGGTTCCATTTAATATTGCATCATATGCGTTATTGACGAAGATGAT 378718 Query 50801 CGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATAT 50860 ||||| ||||| ||| | || || ||| ||||||| |||||||| || ||| | Sbjct 378717 TGCTCATATAGTCGACATGGACTGTGGTGAGTTTGTTCATACATTAGGAGATGCCCATGT 378658 Query 50861 TTACCTCGATCACGTCGATGCTTTAAAGGAGCAATT 50896 |||| | ||||| || |||||||| || ||||| || Sbjct 378657 TTACTTGGATCATGTTGATGCTTTGAAAGAGCAGTT 378622 >seq103 Length=904190 Score = 89.7 bits (98), Expect = 7e-13 Identities = 193/287 (67%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 155762 CAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTTTCAA--CGGCTATTTTATTTAAG 155819 |||||||||||| ||||| ||| || |||| || || ||| | || | | | ||| Sbjct 76269 CAACCCTTCCAACTCAGCACCGGTGAAATTCTTGGT--CAATCCTGCCAACTCGTCAAAG 76212 Query 155820 TCTACGTCGGAAGCTAATATGTTGTGAGATTTCATTTTAGCAACGTGCACCTTTAAAATT 155879 || |||||| || |||| | || | ||||| || ||| | | ||||| Sbjct 76211 TCAACGTCGTCTGCCAATAAATCGTTGGCCTTCATGTTCTTGGTGTGGATCAACAAAATG 76152 Query 155880 TGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGT 155939 | ||| |||||||||||||| || ||||| |||| | || || | || ||| Sbjct 76151 TCCTTACGGCCCTTTTCATCGGGCAACGAGATTTCAATCTGGATCTCAAATCTACCTGGT 76092 Query 155940 CTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTG 155999 || ||||| || || || ||||| |||||| |||||||| || || || || ||| Sbjct 76091 CTCAATAACGCGGTATCGATCAAGTCTAATCTGTTAGTCATACCGATAATCAAGATATTG 76032 Query 156000 TTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || || || ||||| || ||||| | ||| || || ||||| || Sbjct 76031 TTCAATTGATCAACACCATCCATTTTGGCCAACAACTGGTTGACAAC 75985 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 63716 TCGTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTT 63775 ||||||| | | | | ||| || | || || ||| |||| |||||||| ||||| ||| Sbjct 299655 TCGTTAAGGTTAGAATGAGAACTACGAAGATTCCACAAATTGGTGATAAGTTTGCATCTA 299596 Query 63776 TTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACC 63834 ||| | || || ||||| |||| | | ||| | || ||||| ||||| |||||| Sbjct 299595 G-ACATGGCCAGAAGGGTACCATTGGTGTTACGTATAGGCACGAAGACATGCCATTTACC 299537 Query 63835 AAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894 | ||| |||| || ||| | | ||||||||||| ||| |||| ||||||||| Sbjct 299536 TCGCAAGGTGTCGTTCCAGATTTGATTATCAATCCACATGCTATTCCATCTCGTATGACA 299477 Query 63895 GTT 63897 ||| Sbjct 299476 GTT 299474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667073590681080