Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20]
193 sequences; 11,241,723 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq141 120 7e-22
seq101 113 1e-19
>seq141
Length=295507
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | ||||| || || || ||| | || || || ||||||
Sbjct 197100 CAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCAGAC 197041
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| ||||| ||||| || || || ||||| ||
Sbjct 197040 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAG 196981
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || | |||||||| || || | | ||||| || ||
Sbjct 196980 AGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAATATC 196921
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| ||| | || | || || ||| | |||
Sbjct 196920 CAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGA 196882
Score = 114 bits (126), Expect = 3e-20
Identities = 149/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | ||||| || || || ||| | || || || ||||||
Sbjct 197328 CAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCAGAC 197269
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| ||||| ||||| || || || || || ||
Sbjct 197268 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAACAG 197209
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || | |||||||| || || | | ||||| || ||
Sbjct 197208 AGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAATATC 197149
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| ||| | || ||||
Sbjct 197148 CAAAAGGAATCCACATTACA-CTTG 197125
Score = 109 bits (120), Expect = 1e-18
Identities = 148/205 (72%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| | ||||| || || || ||| | || || || ||||||
Sbjct 197556 CAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCAGAC 197497
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| ||||| ||||| || || || || || ||
Sbjct 197496 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAACAG 197437
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || | |||||||| || || | | ||||| || ||
Sbjct 197436 AGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAATATC 197377
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| ||| | || ||||
Sbjct 197376 CAAAAGGAATCCACATTACA-CTTG 197353
>seq101
Length=125820
Score = 113 bits (124), Expect = 1e-19
Identities = 147/203 (72%), Gaps = 3/203 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || ||| | || || || || || ||| | || || |||
Sbjct 105476 AAAATGC---AAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAA 105420
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||| || || ||||| ||||| || ||||||||||| || || ||
Sbjct 105419 TCTTCGGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCT 105360
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||| || | |||||||| || || || | |||||||| || || | | |||
Sbjct 105359 GATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGAT 105300
Query 178095 TATAACGTCCAAAAAGAATCAAC 178117
|| ||| | ||||| ||||| ||
Sbjct 105299 TACAACATTCAAAAGGAATCCAC 105277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728223398442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |