Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20psychrophila_20[genbank_20GCA_5F900186205.1_202017-06-20] 193 sequences; 11,241,723 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq141 120 7e-22 seq101 113 1e-19 >seq141 Length=295507 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | ||||| || || || ||| | || || || |||||| Sbjct 197100 CAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCAGAC 197041 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct 197040 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAG 196981 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| || || | |||||||| || || | | ||||| || || Sbjct 196980 AGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAATATC 196921 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| ||| | || | || || ||| | ||| Sbjct 196920 CAAAAGGAATCCACATTACACTTGGTCTTAAGATTGAGA 196882 Score = 114 bits (126), Expect = 3e-20 Identities = 149/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | ||||| || || || ||| | || || || |||||| Sbjct 197328 CAAATTTTCGTCAAGACTTTGACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCAGAC 197269 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| ||||| || || || || || || Sbjct 197268 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAACAG 197209 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| || || | |||||||| || || | | ||||| || || Sbjct 197208 AGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAATATC 197149 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| ||| | || |||| Sbjct 197148 CAAAAGGAATCCACATTACA-CTTG 197125 Score = 109 bits (120), Expect = 1e-18 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | ||||| || || || ||| | || || || |||||| Sbjct 197556 CAAATCTTCGTTAAAACATTAACAGGTAAGACCATTACCTTAGAAGTTGAGTCATCAGAC 197497 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| ||||| || || || || || || Sbjct 197496 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCGCCAGATCAACAG 197437 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| || || | |||||||| || || | | ||||| || || Sbjct 197436 AGATTAATTTTTGCCGGTAAGCAATTAGAAGATGGCAGAACATTATCTGATTACAATATC 197377 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| ||| | || |||| Sbjct 197376 CAAAAGGAATCCACATTACA-CTTG 197353 >seq101 Length=125820 Score = 113 bits (124), Expect = 1e-19 Identities = 147/203 (72%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || ||| | || || || || || ||| | || || ||| Sbjct 105476 AAAATGC---AAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAA 105420 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| || || ||||| ||||| || ||||||||||| || || || Sbjct 105419 TCTTCGGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAAGGTATTCCACCT 105360 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||| || | |||||||| || || || | |||||||| || || | | ||| Sbjct 105359 GATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGAT 105300 Query 178095 TATAACGTCCAAAAAGAATCAAC 178117 || ||| | ||||| ||||| || Sbjct 105299 TACAACATTCAAAAGGAATCCAC 105277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728223398442