Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq510 246 3e-60 >seq510 Length=157725 Score = 246 bits (272), Expect = 3e-60 Identities = 592/890 (67%), Gaps = 7/890 (1%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||| ||||| ||| | |||||||||||||||||||| || | | Sbjct 114892 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTACCGGCCAA 114833 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA 16781 || ||||| |||||||||||||| ||||| ||| | | | || ||| | ||||| | Sbjct 114832 GGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTATAAACTTTCTTATTACCCAA 114773 Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841 | | ||||||||| || ||| |||| | |||||| |||||||| | | |||| Sbjct 114772 AG-CAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAATTAGAATTCA 114714 Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901 | |||| | | || |||||||| || || ||| || || || || |||| |||| Sbjct 114713 TACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTTCAACAGCTT 114654 Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCA 16961 | ||| || | |||| ||| || ||| ||| || | ||| || | | Sbjct 114653 CAACAATGATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAATGGGAGAATAATA 114594 Query 16962 GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCA 17021 ||| || ||||| |||||| || || ||||| | || | ||| || || || |||| Sbjct 114593 AACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGGAGAAAGTCA 114534 Query 17022 ACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGA 17081 | || |||||| |||| || ||||||||||| || | || || || ||| ||||| Sbjct 114533 AACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAACCACTAAAGA 114474 Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTAC 17141 | ||||| || | | ||||| || | |||| ||| || || || ||||| | Sbjct 114473 AAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCTT 114414 Query 17142 GAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCT 17201 | |||||||| |||| || ||||||| | || || || |||| ||||| | Sbjct 114413 GGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTTTCAATGGCAT 114354 Query 17202 TAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261 ||||||| || ||| ||| | || | | ||| || || || | || |||| Sbjct 114353 TAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATCAATAAAGAATACA 114294 Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTA 17321 |||| || || ||||| ||||| || ||||| || ||||| || ||||| | | Sbjct 114293 TTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTAGCTTCTGGCA 114234 Query 17322 TTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGG 17381 ||||||||| | | || ||| ||| |||||| || || || || || || | Sbjct 114233 GTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATACCATCTGATGCAG 114174 Query 17382 CGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT--CCGGTGTAA--GAACGCGC 17437 | ||||| ||||| | ||| || ||| |||| | | || ||| | | | Sbjct 114173 CAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGT-TAATTTATTGTTC 114115 Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497 || || | |||||||| || ||| |||||||| | |||||||| ||| | || Sbjct 114114 CAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCT 114055 Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATA 17547 |||||||| | ||||||||| |||| ||||| || || || | |||||| Sbjct 114054 TTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACATA 114005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542294177480