Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq510 311 9e-80 >seq510 Length=157725 Score = 311 bits (344), Expect = 9e-80 Identities = 634/937 (68%), Gaps = 15/937 (2%) Strand=Plus/Minus Query 15892 TTTAGAAGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTT 15951 |||||| |||||| | |||| |||||| ||| | |||||||| ||||||||||| Sbjct 114901 TTTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTT 114842 Query 15952 TCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTG---AAAATATCTT 16008 || | || || ||||||||||| |||||||| ||||| ||| | ||| | |||| Sbjct 114841 ACCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTATAAACTTTCTT 114782 Query 16009 AGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAA 16068 | ||||| | ||| ||||||||| || ||| |||| | ||||||||||||||| Sbjct 114781 AT--TACCCAAAGCAAATAA-TAATCTATCAGCAACATATTCAACATATTGACACATTAA 114725 Query 16069 GTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTAT 16128 | |||| || |||| | || |||||||| | || ||| ||| || ||| || Sbjct 114724 ATTAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAAT 114665 Query 16129 CACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTC---AGACGGTGTATGGTTTAG 16185 |||| ||||| |||||| | | | |||| ||| ||| ||| | || Sbjct 114664 TTCAACAGCTTCAACAATGATTT---TTTCAACAATTTCTGGAGATGGTCTATTTTGTAA 114608 Query 16186 GTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTC 16245 || || | || ||| || || || ||||| ||||| ||||| | || | ||| Sbjct 114607 ATGGGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTC 114548 Query 16246 GTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA 16305 ||||| ||||| || |||||||| |||| || |||||||| || || | |||||| Sbjct 114547 ATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAA 114488 Query 16306 TGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGT 16365 ||| || |||||| ||||| |||| || |||||||| | |||| ||| || || Sbjct 114487 TGAACCACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAA 114428 Query 16366 AGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCAT 16425 ||||||||||| | |||||||| |||| || ||||||| | ||||| || Sbjct 114427 AGCATCTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAAT 114368 Query 16426 CGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAAT 16485 |||| ||||| ||||| || || ||| || ||| | | ||| || ||||| Sbjct 114367 ATTTTCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAAT 114308 Query 16486 CAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCA 16545 || |||| |||||||| || || ||||| || || || ||||| ||||| || | Sbjct 114307 CAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGA 114248 Query 16546 TCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGAT 16605 | ||| || | | ||| ||||| | |||| ||| | | || ||||| || || Sbjct 114247 TTTAGCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTAT 114188 Query 16606 ACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTC---GTCAGA 16662 ||| || |||||||||||| ||||| | ||| || ||| |||| |||| Sbjct 114187 ACCATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGT 114128 Query 16663 TGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722 | | | | |||||| | |||||||| || ||| |||||||| | |||||||| Sbjct 114127 TAATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAA 114068 Query 16723 GCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 | ||| | || |||||||| | |||||||| |||| ||||| || ||||| | || Sbjct 114067 GGAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAAC 114008 Query 16783 GTATCTATCTAAGGATTCCTTTAACACGGGTTCATCT 16819 || | | | | ||| ||||| | ||||| ||| Sbjct 114007 ATAACGACGTTTGTTTTCTTTTAATAATGGTTCTTCT 113971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511411133340520