Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq442 170 1e-37 >seq442 Length=162164 Score = 170 bits (188), Expect = 1e-37 Identities = 399/597 (67%), Gaps = 20/597 (3%) Strand=Plus/Plus Query 101676 TTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACT 101735 |||||| ||||||| || |||| |||| || ||||| || ||||| |||||||||| Sbjct 129622 TTTTAAT-GCATCAACATGGTCTAAGTAGACATGTGCATCACCCATAGTGTGGATAAACT 129680 Query 101736 CTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAA 101795 | ||| | | || || |||||||||||||| ||||| | | ||| |||| Sbjct 129681 CCCCACAATCCATATCAGCCACATGAGCAATCATTTTGGTTAATAATGCATAAGAGGCAA 129740 Query 101796 TGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT 101855 | ||||| || || || || ||||||||| ||||||||||||| ||| || | || Sbjct 129741 TATTAAAAGGAACACCCAATCCCATATCACAAGATCTTTGATACAACAAACATGACAACT 129800 Query 101856 TTC------CAT-CACAG--------ACATAAAATTGACTTAATACATGACAAGGCGGCA 101900 | ||| | | | ||||||||||||| || |||||||| || || | Sbjct 129801 TAGGTTTAGCATTCTCTGGGAAGTTAACATAAAATTGACAGAAAACATGACATGGAGGTA 129860 Query 101901 ACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAG 101960 | |||| || | |||| | ||||| |||| ||| | || |||||||| | Sbjct 129861 AAGCCATCTTGTCGAAATCTGGAGGGTTCCATGCACTCATGATTATTCTTCTATCATATG 129920 Query 101961 GGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAAT 102020 |||| || |||| | | ||| | | || |||||| ||| |||| || |||||| Sbjct 129921 GGTTAGTCTTTAATTTTTTAATTATATCTTGTAATTGATCATAACCTTGCCCAGTATAAT 129980 Query 102021 CGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTC 102080 | || | ||||||||| || || ||||| ||||| || |||||||| || |||| Sbjct 129981 CAGCATCACAATTTTTATATTCAGCACCAAAATGTCTCCATTGGAATCCATATACTGGTC 130040 Query 102081 CAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCAT 102140 | | ||| |||||| | || | || || | ||| |||||| || | ||||||| Sbjct 130041 CCAAATCACCTTCACGACGGTGAGTTAATCCCAATTTGTCTAAATATTCACGGGATCCAT 130100 Query 102141 TCGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCT 102198 | | ||||| || | || || | || | | | | || || || || ||||| Sbjct 130101 TACCTTCCCATATTTTGACTCCCTTGTTGGTTA-ATATTTTAGC-ATCGGTTGATCCAGC 130158 Query 102199 GATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAA 102255 |||||||| || | ||| | || || |||| | | |||||| |||| ||||| || Sbjct 130159 AATAAACCATAATAATTCATGAATAATACCTTTGGAGAATACTTTCTTGGTAGTCAA 130215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248950195261