Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq510 421 8e-113 >seq510 Length=157725 Score = 421 bits (466), Expect = 8e-113 Identities = 1387/2142 (65%), Gaps = 53/2142 (2%) Strand=Plus/Minus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 ||||| | || |||||||| | || || || | || || | | |||||||| || Sbjct 74048 TTGTCAATAGTAAATTGAATAGCGGCAGAAGCAGCTTGAGTTCTCAAGTAGTACATACCA 73989 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 || || | ||| |||| |||||||| ||||||||||| | ||| | | || Sbjct 73988 GTCTTCAAACCTTTCTTCCAACCGTAAAAGTGCATACTTGTCAATTTACCCATAGTTGGT 73929 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 ||| || || ||||||| ||||||| |||||| ||||| || | || || |||||| Sbjct 73928 TCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCC 73869 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038 || | ||||| |||||||| |||||||||| ||| || || | || || || Sbjct 73868 ATATCAATGATGTGCTTTTGTGAGATTTCCCAAACAGTCTTGTACAAAGCTTTGATTTCA 73809 Query 53039 TCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095 ||||| | ||||| | | |||||||| ||| | ||||| || |||| || Sbjct 73808 TCTGGGATGTTTGGCAAACTTTGAATAGAACCATTGTTGGAAATAATATTACTCTTCATA 73749 Query 53096 TCATCATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 |||||||||| | | | | || |||| || | | | | || || || | | Sbjct 73748 GCATCATTCCAGA---TACCCAAGTCAACTAAATCTTTCAACAAGTATGGGTTGACAATT 73692 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || ||||| |||| ||| ||||| | | |||||| || || || ||||| | | | Sbjct 73691 TGGAATTCACCAGCCAAGACTCTTCTGGAGTAAATGTTGGAAGTGTAAGGTTCGAAACAT 73632 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 ||||| || ||||||||||||| ||| |||||||| ||||| || || ||||| || Sbjct 73631 TCATTGTTACCCAAAATTTGAGAAGTAGATGCAGTTGGCATTGGAGCAACCAACAAGGAG 73572 Query 53273 TTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 53330 ||||| | ||| ||||| | || || | ||| | || ||||||| ||| | || | Sbjct 73571 TTTCTCAAACC--ATGTTTGGCCATGTTTTGTTTCAAAGTATCCCAATCCCATAATTCAG 73514 Query 53331 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 53390 ||| ||||| | ||| | || || ||| | Sbjct 73513 TTGGTTTTCTGTTCCACAAATCAAATTGTAACAAACCTTGGGAAGCTGGAGAGCCTGGGT 73454 Query 53391 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 53450 | | || || | ||||| | ||||| | |||| | || | ||| | | || Sbjct 73453 AACTTTCATAAGCACCTTCTTCTTCAGCCAATTCAATGGAAGATTCAACAGCAGCATGAT 73394 Query 53451 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 53510 ||||||||||||| || | | |||| ||| ||||| | ||| ||||| | Sbjct 73393 AAATGGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCGAATGGCAATC 73334 Query 53511 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 53570 | || ||||| || || ||||| ||||||||||| | | || |||||||||||| Sbjct 73333 TCAATGTCATAAAGGCATCAGCTAAACCTTGAACACCCAATGCAATTGGTCTATGTCTCA 73274 Query 53571 TATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630 | ||||| ||||||||||||||| || || || ||| || |||| | | || | || Sbjct 73273 TGTTAGATTTTTCAGCTTCTGGAACTGGGTAGTAGTTACGGTCAATAACTCTGTTCAAGT 73214 Query 53631 TTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAAAT----TGTC 53681 | | || ||||| || || | | ||| ||| | ||| | | | Sbjct 73213 TACGAGTAACAACTTTAGTAACTTCATGTAATTTATCAAAGTTGTACCAAGTACTGTTTT 73154 Query 53682 CATCTATT---ACAAA--CATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736 |||| || ||||| || | |||||||||||| |||| |||||||| || || || Sbjct 73153 CATCATTTTCAACAAAAGCAGG--CAATGCAATAGAAGCCAAGTTACAAACAGCAACTTC 73096 Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796 || | | | | ||||| | || ||| || | ||| | | ||||| || || Sbjct 73095 ATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTAGAAGATTTGATAACACCCAA 73036 Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856 || | ||| || |||| ||||||| ||||| ||||| | |||||||| ||||| || Sbjct 73035 GTTCTTTTGGTTGGTCTTGGTGTTACAAGCATCTTTATATAACATGAATGGAGTACCGGT 72976 Query 53857 TTCAATCTGGG-ATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATT-TG 53914 |||| | || | | || | | | || | ||| | | ||||| || || || | Sbjct 72975 TTCAGTTTGAGCACTCAAGA-TGGCATACCACAACTTTTGGGCCTTGAT---AGTTTGTC 72920 Query 53915 TATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACAT 53972 || | | |||||| |||||||| ||||| || ||| || || || || | |||| Sbjct 72919 TACCACGGTTTTCTTTTTCGTATTTGGTATATAACTCTTCGAATTCATCACCATAGACAT 72860 Query 53973 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 54032 ||| || ||| ||| | ||| | | || | ||| || ||| | | |||| Sbjct 72859 CAGACAAACCTGGAGCTTCGTTTGGAGAGAATAAGGTCCAGTCGGCGTTTTGTTCAACTC 72800 Query 54033 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 54092 |||||||| | ||| || ||||| | ||| || | |||||| | ||| ||| | Sbjct 72799 TCTTCATAAACAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTT 72740 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | || || |||||| ||| ||| | ||| | | |||||| ||||| ||||||| Sbjct 72739 CTTTACCGTGGTTCTTTCTAATATCAATGAAATCAAATATATCACTGTGCCATGGTTCCA 72680 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 |||| | || | | | || || | |||||| || || || || | ||| | || |||| Sbjct 72679 AGTACAAGGCAAAAGCACCTGGTCTTTTGTTACCACCTTGGTCAACGTAACGGGCAGTGT 72620 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 | ||| ||||||| | ||| ||||| ||||||||||||| |||||| || || | || | Sbjct 72619 TGTTAAAAACTCTGACCATAGGAATGATACCATTGGATGTACCATTAGTACCAGCAATGT 72560 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 | ||| | | |||||| || ||| | ||| || || || || | || || | Sbjct 72559 ATGCACCAGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAA 72500 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 |||| || ||| ||| || ||||| || || || || ||| ||| ||| |||| || Sbjct 72499 TTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATAGAATCGTCCTTCATAGCAA 72440 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | | ||||| |||||||| | | || || || || || || ||||||| Sbjct 72439 GCAAGAAACATGAGGACATTTGTGGTCTTGGGGTACCTGCGTTGAACAAACAAGGAGAAC 72380 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCT----ATA 54508 | || || || || ||| ||| | | || || || || | ||| ||| ||| Sbjct 72379 CATGTGTGAAGTATCTTTGAGACATCAAGTTATATGTTTCAA----TGACTCTTGGAATA 72324 Query 54509 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 54568 || | ||||| || | || || | ||| | | || || ||||||||| | | | Sbjct 72323 TCTCTACCGTGAATACCAATAGCAACTCTCATAATTAAATGTTGTGGTCTTTCAGCAACC 72264 Query 54569 TTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA- 54627 || || || | |||||| ||| |||||| ||||| |||||||| ||||| || Sbjct 72263 TTACCATTAATACGTAACAAGTAAGATCTTTCCATGGTTTTGAAACCAAAGTAGTTATAA 72204 Query 54628 -TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686 ||||| |||| ||||| | |||| | ||||| | || || | || || || | | Sbjct 72203 TTGAAA--TCTCTATCGTAGACAATAGCAGAGTTTAATTCGTCTTCATTTTCCTTGATGA 72146 Query 54687 CATC-CATGGTAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 54744 ||| ||| | | | ||||||| || ||||||||| ||| |||| || |||| ||| Sbjct 72145 TATCATATGTT--TCCTTTGAAATCATAGGAGAATGTAAACCAGTTTTTGGGTTGATATA 72088 Query 54745 GTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 54804 | ||||| | | |||| | || |||| | |||| ||| |||| ||| || Sbjct 72087 TTCGTATAAAGCTTCGGAAACTTTGGAATATTGTTTGGTGGTTTGTTTATGTAAATTGGA 72028 Query 54805 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 54864 ||||| |||||||| || | || || ||||| ||||| ||||| || || || Sbjct 72027 GACGGCAATTCTAGCTGCCAAAACAGCGTAATCTGGATGAACGGTAGTCATGGTAGCAGC 71968 Query 54865 TATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCC 54906 ||||| || | || | || ||||| || || || || || Sbjct 71967 AATTTCAGCAGCCAAGTTATCTAATTCAACAGTGGTAACACC 71926 Score = 405 bits (448), Expect = 6e-108 Identities = 632/900 (70%), Gaps = 14/900 (2%) Strand=Plus/Minus Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883 ||| ||||||||| || |||||| || ||| || | ||||||||||| ||||||| Sbjct 114902 CTTTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTT 114843 Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTT 23943 |||| | || || ||||||||||||||||| ||||||||||||||||||| | | | | Sbjct 114842 TACCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTATAAACTTTCT 114783 Query 23944 TAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTT 24003 || ||||| || | | |||||||| || ||| | || | |||| ||| | | Sbjct 114782 TATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAAT 114723 Query 24004 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAG 24063 | ||||||| |||| | |||||||||||| |||||| | |||||| |||||| Sbjct 114722 TAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTT 114663 Query 24064 AGACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAA 24119 || || || | ||| ||| || || ||||| | ||| || |||| Sbjct 114662 CAACAGCTTCA---ACAAT-GATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAA 114607 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || || | ||||| || ||||| |||| ||| || ||||||| ||||||||| Sbjct 114606 TGGGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCA 114547 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 ||||| || || | || ||||| | || | |||||| | |||||| || || |||||| Sbjct 114546 TTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAT 114487 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---A 24296 || ||| ||||||||| ||||| | || ||||| |||| | |||||| |||| | Sbjct 114486 GAACCACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAA 114427 Query 24297 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 | | | || || ||||| || |||||||| || || || | | ||| || || Sbjct 114426 GCATCTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATA 114367 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 | || || |||||||| | | | ||| | |||||||||||| || |||||| Sbjct 114366 TTTTCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATC 114307 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 || | | ||||||||| |||||||||||||| || |||||||| || || || || Sbjct 114306 AATAAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGAT 114247 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 |||| || | | || ||||| | |||| ||| ||||||||||||| ||||| Sbjct 114246 TTAGCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATA 114187 Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 24596 || || || |||||||| ||||| || ||||| ||| |||| | ||| Sbjct 114186 CCATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGTT 114127 Query 24597 AGTTTA---TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653 | |||| |||||||||| | ||||||| || ||| |||||||| |||||||||| Sbjct 114126 AATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAG 114067 Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713 || || || || |||||||| | |||||| || ||||| |||| ||||||||| |||||| Sbjct 114066 GAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACA 114007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717807603280