Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq442 163 2e-35 >seq442 Length=162164 Score = 163 bits (180), Expect = 2e-35 Identities = 384/575 (67%), Gaps = 21/575 (4%) Strand=Plus/Plus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 || ||||| || | |||||| ||||| || ||| | | | ||||| ||||| || ||| Sbjct 129653 TGTGCATCACCCATAGTGTGGATAAACTCCCCACAATCCATATCAGCCACATGAGCAATC 129712 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 || ||||||| | ||| ||||| |||||||| || || | |||||||||| Sbjct 129713 ATTTTGGTTAATAATGCATAAGAGGCAATATTAAAAGGAACACCCAATCCCATATCACAA 129772 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTT---TCCATCACAC------------ACATAA 97236 ||||||||||| ||| ||| || | ||| | | || | |||||| Sbjct 129773 GATCTTTGATACAACAAACATGACAACTTAGGTTTAGCATTCTCTGGGAAGTTAACATAA 129832 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTT-TGGAACATCTAAGACATTCCA 97295 || |||| || |||||||| || || || ||||| || | ||| |||| ||||| Sbjct 129833 AATTGACAGAAAACATGACATGGAGGTAAAGCCATCTTGTCGAA-ATCTGGAGGGTTCCA 129891 Query 97296 AGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTT 97355 |||| ||| | ||||||||||| |||||| || | || | |||||||| | | Sbjct 129892 TGCACTCATGATTATTCTTCTATCATATGGGTTAGTCTTTAATTTTTTAATTATATCTTG 129951 Query 97356 TAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAA 97415 |||||||||| |||| ||| ||||| | | | || |||||| || ||||| Sbjct 129952 TAATTGATCATAACCTTGCCCAGTATAATCAGCATCACAATTTTTATATTCAGCACCAAA 130011 Query 97416 ATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACC 97475 ||| ||||||||||||||||| || ||||| | || ||||| | | | || || Sbjct 130012 ATGTCTCCATTGGAATCCATATACTGGTCCCAAATCACCTTCACGACGGTGAGTTAATCC 130071 Query 97476 AAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AGATGCT 97533 | || |||||||| | |||||||| | ||||| || | || || | || | Sbjct 130072 CAATTTGTCTAAATATTCACGGGATCCATTACCTTCCCATATTTTGACTCCCTTGTTGGT 130131 Query 97534 GCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCT 97593 || | || || || || ||||| |||||||| || ||||| | | || |||| Sbjct 130132 -TAATATTTTAGC-ATCGGTTGATCCAGCAATAAACCATAATAATTCATGAATAATACCT 130189 Query 97594 CTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | | |||||| |||| || || || | ||| || Sbjct 130190 TTGGAGAATACTTTCTTGGTAGTCAACAAAGGGAA 130224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781840294270