Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq510 405 5e-108 >seq510 Length=157725 Score = 405 bits (448), Expect = 5e-108 Identities = 625/886 (71%), Gaps = 17/886 (2%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| ||| |||||||||||| || || || ||||| || | || || ||||| Sbjct 114883 TTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTACCGGCCAAGGAGATATT 114824 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCAT--CCCAATTCCAAC 16060 |||||| |||||||| ||||| | |||| || | | || || ||||| | || Sbjct 114823 TTCCATGAAATCAAATGGATTGGT--AACATTATAAACTTTCTTATTACCCAAAGCAAAT 114766 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 ||||||||||| || ||| |||| | ||| || |||||||| | | ||||| |||| | Sbjct 114765 AATAATCTATCAGCAACATATTCAACATATTGACACATTAAATTAGAATTCATACCTAAT 114706 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 || ||| || | || || || ||| | | |||||| || | ||| ||||||| || Sbjct 114705 AAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTTCAACAGCTTCAACAATG 114646 Query 16181 ATATCTCTTACTACACTATTTAACG-GAGGGTTTAAT----AAGTGTTTAAACATTATAC 16235 || | || | ||| |||| | || ||| || | || || || | || || Sbjct 114645 ATTT---TTTCAACA--ATTTCTGGAGATGGTCTATTTTGTAAATGGGAGAATAATAAAC 114591 Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295 ||||||||||| ||| || ||||| || |||| ||||| || || || || || | || Sbjct 114590 AAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGGAGAAAGTCAAAC 114531 Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355 ||||||| | |||| ||||| | |||||| |||| |||||||||||| |||||| | Sbjct 114530 CTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAACCACTAAAGAAAA 114471 Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415 ||||||||| || ||||| |||||||||| ||| | || || |||| || | Sbjct 114470 TACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCTTGGA 114411 Query 16416 tccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAA 16475 ||||||| | ||||||| ||||||| ||| ||| || || || || ||||||| Sbjct 114410 TCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTTTCAATGGCATTAA 114351 Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535 |||| ||| ||||| |||| || |||||| || || | |||| |||||||| Sbjct 114350 ATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATCAATAAAGAATACATTT 114291 Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595 | |||||||| || ||||| || |||||||||||||| || ||||||| | | || Sbjct 114290 CAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTAGCTTCTGGCAGTT 114231 Query 16596 GTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAA 16655 | ||||||| |||| |||| |||| ||||| |||||||| ||||| || |||| Sbjct 114230 GAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATACCATCTGATGCAGCAA 114171 Query 16656 AAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGT 16712 |||| || | | |||||| | | |||| ||||| | | | || ||| | Sbjct 114170 AAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGTTAATTTATTGTTCCAAT 114111 Query 16713 CAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTT 16772 || |||||||| |||||| || ||||| | |||||||| ||||| |||| |||| Sbjct 114110 CATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTT 114051 Query 16773 TATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818 |||| | ||||| || || | ||| ||| ||||||| |||||| Sbjct 114050 TATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACATA 114005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509045704600