Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq442 114 2e-20 >seq442 Length=162164 Score = 114 bits (126), Expect = 2e-20 Identities = 244/354 (69%), Gaps = 18/354 (5%) Strand=Plus/Minus Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATATTGGGTG 104462 |||||| ||||| | ||||| || || |||||||||| ||||| | |||| || Sbjct 130048 TGATTTGGGACCAGTATATGGATTCCAATGGAGACATTTTGGTGCTGAATATAAAAATTG 129989 Query 104463 CGATAATAAATATGGTGG-------TATAGATCAACTCAAAAATATTATTACAACAATTC 104515 ||| | | ||| ||| ||| |||||| | || |||| |||| || |||| Sbjct 129988 TGATGCTGATTATACTGGGCAAGGTTAT-GATCAATTACAAGATATAATTAAAA-AATTA 129931 Query 104516 AAAATGAACCT-TGGGATAGAAGAATGAT-ATTATTAGCTTGGAACCCAAAGGATAATTC 104573 || | |||| | ||||||||||| || || | | || |||||||| ||| ||| Sbjct 129930 AAGACTAACCCATATGATAGAAGAATAATCATGAGT-GCATGGAACCCTCCAGAT--TTC 129874 Query 104574 TAAAA--TGGCACTTCCTCCTTGTCATTGTATAGCACATTTTGATGT-AAGTTCAAAAAT 104630 | || |||| | ||||| |||||| | | || ||| |||| || ||| | | Sbjct 129873 GACAAGATGGCTTTACCTCCATGTCATGTTTTCTGTCAATTTTATGTTAACTTCCCAGAG 129814 Query 104631 AAATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATCTGCAGATATGGGGTTGGG 104690 || || |||| | ||||| ||| || | |||||||||| |||||||| ||||| Sbjct 129813 AA-TGCTAAACCTAAGTTGTCATGTTTGTTGTATCAAAGATCTTGTGATATGGGATTGGG 129755 Query 104691 AGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCATGT 104744 ||||||||||| || || ||||||||||||||| | || || |||||||| Sbjct 129754 TGTTCCTTTTAATATTGCCTCTTATGCATTATTAACCAAAATGATTGCTCATGT 129701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679810057685520