Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq100 109 4e-19 seq93 89.7 4e-13 >seq100 Length=74788 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||| ||||| ||||||||||||| || ||| ||| |||||| Sbjct 22433 ACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCC 22492 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| |||| | |||||||||||| || | ||||| ||||| | Sbjct 22493 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGA 22552 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | ||||| | | | ||||| || ||| ||| | ||| || |||| Sbjct 22553 ATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTA 22612 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 || || || || || || ||||||||||| ||||| Sbjct 22613 CCAGTTAAGGTCTTGACGAAAATTTGCATCTTTAA 22647 >seq93 Length=17569 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | |||||||| ||||| |||||||| || | | ||| ||| ||||| Sbjct 17133 ACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCT 17192 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || || | || | |||||||||||| || | ||||| ||||| Sbjct 17193 AATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGG 17252 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| ||||| | | | ||||||| | || ||| | || || |||| Sbjct 17253 ATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTA 17312 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| ||||| || ||||||||||| Sbjct 17313 CCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | |||||||| ||||| |||||||| || | | ||| ||| ||||| Sbjct 17361 ACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCT 17420 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || || | || | |||||||||||| || | ||||| ||||| Sbjct 17421 AATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGG 17480 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| ||||| | | | ||||||| | || ||| | || || |||| Sbjct 17481 ATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTA 17540 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| ||||| || ||||||||||| Sbjct 17541 CCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341637516695