Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq510 152 5e-32 seq93 102 7e-17 seq100 100 3e-16 >seq510 Length=157725 Score = 152 bits (168), Expect = 5e-32 Identities = 595/926 (64%), Gaps = 31/926 (3%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 || |||||| | || |||| || ||| | | ||| |||||||| ||| |||| | Sbjct 113972 GAAGAACCATTATTAAAAGAAAACAAACGTCGTTATGTTATGTTTCCAATTAAATACCAT 114031 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||||| | || ||||| || ||||| || |||||||| | |||||||| || Sbjct 114032 GAAATTTGGAATTTTTATAAAAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAGTTGAT 114091 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGAT--TCCCTCAAAGAATC-TGAGAGAAATTTTATT 57683 | ||| ||| || |||||| | | | || || ||| ||| | |||||| Sbjct 114092 TTAAGTAAAGATTTGGATGATTGGAACAATAAATTAACTGATAATGAAAGATACTTTATT 114151 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 || ||||| ||||| || ||||| |||||||| ||||| || ||||| || ||| Sbjct 114152 TCTAGAGTTTTGGCCTTTTTTGCTGCATCAGATGGTATAGTTAATGAAAATTTAGTTGAA 114211 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | ||||| ||||| ||| || | || || | || ||||| || |||||| | Sbjct 114212 AATTTTTCTGCTGAAGTTCAACTGCCAGAAGCTAAATCATTTTATGGTTTTCAAATTATG 114271 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863 || |||||| | ||||| ||||||||||| || | || || || || || || | | | Sbjct 114272 ATGGAAAACATTCATTCTGAAATGTATTCTTTATTGATTGAAACTTATGTTAA--AGATC 114329 Query 57864 GACGAGAAAC--GTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGG 57921 || |||| | | | || || || || |||| || || || |||| || | Sbjct 114330 CACAAGAAGCTGATTTCTTATTTAATGCCATTGAAAATATTCCATGTATTACCAAAAAAG 114389 Query 57922 CAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT---CGCCGAGAGGCTAA 57978 | || ||| | || |||||||| || | | | | || || || || | Sbjct 114390 CTGATTGGGCCATTAAATGGATCCAA---GATAAAGATGCTTTATATGCTGAAAGATTGG 114446 Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 | || || || || | |||||||| |||||| || ||||| | || |||||| Sbjct 114447 TTGCTTTTGCTGCTATTGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTTTGGT 114506 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 | || || | || ||||||| || |||| || ||| || || || | | || | Sbjct 114507 TAAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAATTAATTTGTAGAGATG 114566 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC--AATAAACCGAC 58156 | ||| | |||||||||||||| || || || |||| |||| | |||| ||| | Sbjct 114567 AAGGTTTACATACTGATTTTGCTTGTTTA--TTATTCTCCCATTTACAAAATAGACCATC 114624 Query 58157 GCGGGATCGCATCTTGGACATTATCA---CCGAGGCGGTCGCGATCGAAAATGAGTTTGT 58213 | || || | || | |||| || || || | || ||||| || | | | Sbjct 114625 TCCAGA---AATTGTTGAAAAAATCATTGTTGAAGCTGTTGAAATTGAAAAAGAATATTT 114681 Query 58214 CACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACAT 58273 || || || || || || | | | |||||||| | |||| |||| | || | Sbjct 114682 TACTGATGCTCTTCCAGTTTCTTTATTAGGTATGAATTCTAATTTAATGTGTCAATATGT 114741 Query 58274 TGAGTTTGTTGCCGACAGACT----TTTGCTCGAACTGATTGGAGAGCGTCATTACAACA 58329 ||| | |||||| || ||| | |||||| | || || || ||| || Sbjct 114742 TGAATATGTTGCTGATAGATTATTATTTGCTTTGGGTAATAAGAAAG----TTTATAATG 114797 Query 58330 CGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCG 58389 | ||||| |||||||| ||| | ||||| | | || || || |||||||||| Sbjct 114798 TTACCAATCCATTTGATTTCATGGAAAATATCTCCTTGGCCGGTAAAACTAACTTTTTCG 114857 Query 58390 aaaaaaaaGTTAGCGAATATCAAAAA 58415 |||| | |||| || ||||||||| Sbjct 114858 AAAAGAGAGTTTCTGATTATCAAAAA 114883 Score = 136 bits (150), Expect = 4e-27 Identities = 418/642 (65%), Gaps = 6/642 (1%) Strand=Plus/Minus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 |||||| | ||||||| | ||| || ||||||| || ||||| || | || | Sbjct 72807 TTCAACTCTCTTCATAAACAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCT 72748 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | || ||||| ||| ||||||| | | ||| | || || || | || ||||| Sbjct 72747 GATTTCTTCTTTACCGTGGTTCTTTCTAATATCAATGAAATCAAATATATCACTGTGCCA 72688 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || | ||| | |||||| || || ||||| || || || || || || |||||||| Sbjct 72687 TGGTTCCAAGTACAAGGCAAAAGCACCTGGTCTTTTGTTACCACCTTGGTCAACGTAACG 72628 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| |||||||| | ||||| | ||| || | || ||| ||||| | || || Sbjct 72627 GGCAGTGTTGTTAAAAACTCTGACCATAGGAATGATACCATTGGATGTACCATTAGTACC 72568 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | | ||| | | |||| |||||||| ||| ||||| || || || | Sbjct 72567 AGCAATGTATGCACCAGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACT 72508 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || || | || ||| ||||| ||| ||||| || || || || || || || Sbjct 72507 CTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATAGAATCGTCCTT 72448 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || | ||||||||| || |||||||| | | | || ||| | || ||||| Sbjct 72447 CATAGCAAGCAAGAAACATGAGGACATTTGTGGTCTTGGGGTACCTGCGTTGAACAAACA 72388 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || | || || ||||||| | ||||| | || || || || ||| | Sbjct 72387 AGGAGAACCATGTGTGAAGTATCTTTGAGACATCAAGTTATATGTTTCAATGACTCTTGG 72328 Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC-- 23877 ||| | |||| ||||| ||||| || || || | ||| || | | ||| ||||| || Sbjct 72327 AATAT-CTCTACCGTGAATACCAATAGCAACTCTCATAATTAAATGTTGTGGTCTTTCAG 72269 Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | | | || ||||| |||| || || | || ||| ||||| || ||||| || Sbjct 72268 CAACCTTA--CCATTAATACGTAACAAGTAAGATCTTTCCATGGTTTTGAAACCAAAGTA 72211 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || ||| || || || | ||||| || || || || || || Sbjct 72210 GTTATAATTGAAATCTCTATCGTAGACAATAGCAGAGTTTAA 72169 Score = 118 bits (130), Expect = 9e-22 Identities = 298/448 (67%), Gaps = 4/448 (1%) Strand=Plus/Minus Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213 || ||||| || ||||||| ||| ||||||| ||||||| || || |||||||| Sbjct 74000 TAGTACATACCAGTCTTCAAACCTTTCTTCCAACCGTAAAAGTGCATACTTGTCAATTTA 73941 Query 22214 CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCT 22273 || | | || | |||| | ||| || || ||| ||||| || || || || Sbjct 73940 CCCATAGTTGGTTCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCT 73881 Query 22274 CGATCGGCGGCCATATTTATCAATGTACGCATC-GACATTTCCCATACGGTCTTGTACAG 22332 | ||| || ||||||| || | ||| | | || |||||||| || |||||||||| Sbjct 73880 CTATCAGCAGCCATATCAATGA-TGTGCTTTTGTGAGATTTCCCAAACAGTCTTGTACAA 73822 Query 22333 TTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATGA 22391 |||| || || || | || | | || || | || || || ||| || | Sbjct 73821 AGCTTTGATTTCATCTGGGAT-GTTTGGCAAACTTTGAATAGAACCATTGTTGGAAATAA 73763 Query 22392 TCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGAC 22451 | | | || || | ||| ||||| | ||| | | | |||||||| | || | Sbjct 73762 TATTACTCTTCATAGCATCATTCCAGATACCCAAGTCAACTAAATCTTTCAACAAGTATG 73703 Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || | ||| || || || | |||||| | | |||||||||||| ||| | | Sbjct 73702 GGTTGACAATTTGGAATTCACCAGCCAAGACTCTTCTGGAGTAAATGTTGGAAGTGTAAG 73643 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 |||||||| |||||||||| |||| || |||| || || || || ||||| || || | Sbjct 73642 GTTCGAAACATTCATTGTTACCCAAAATTTGAGAAGTAGATGCAGTTGGCATTGGAGCAA 73583 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTT 22599 || | ||||||||||| || || || Sbjct 73582 CCAACAAGGAGTTTCTCAAACCATGTTT 73555 >seq93 Length=17569 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||| |||| || ||||| || || | || |||||| | || Sbjct 17569 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17510 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | |||||| | ||| || || ||||| | || || || || Sbjct 17509 GACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAA 17450 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || |||||||| ||||| || |||||| || ||| | ||||| ||| Sbjct 17449 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAAC 17390 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| || | || |||| | ||| |||| || |||| Sbjct 17389 ATCCAAAAGGAATCAACCTTACACTTGGTTTTGAGATTGAGAGGTGGTA 17341 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||| |||| || ||||| || || | || |||||| | || Sbjct 17341 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17282 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | |||||| | ||| || || ||||| | || || || || Sbjct 17281 GACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAA 17222 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || |||||||| ||||| || |||||| || ||| | ||||| ||| Sbjct 17221 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAAC 17162 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| ||||| || | || |||| | ||| |||| || ||| Sbjct 17161 ATCCAAAAGGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGT 17114 >seq100 Length=74788 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 || ||| |||||||||||||| ||||| | || || ||||| || ||| | || || || Sbjct 22648 ATTAAAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGA 22589 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 | | ||||||| |||| | |||||| | || || || ||||| | || || Sbjct 22588 ATCCTCCGACACCATCGACAATGTCAAATCTAAGATTCAAGATAAAGAAGGTATTCCACC 22529 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || || || | | || || ||||| ||||| ||||||||| || ||| || ||| Sbjct 22528 TGATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTGTCCGA 22469 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| ||||| ||||| || | || |||| | ||| |||| || ||| Sbjct 22468 CTACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 22414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763552667120