Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq510 167 5e-36 seq442 138 2e-27 seq154 96.9 7e-15 >seq510 Length=157725 Score = 167 bits (184), Expect = 5e-36 Identities = 336/493 (68%), Gaps = 14/493 (3%) Strand=Plus/Plus Query 101870 TGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCGGAACTAATTGTTGCCTTT 101926 ||||| ||||| ||||| ||| || | | ||| || ||| | | ||||| ||| Sbjct 114395 TGGGCCATTAAATGGATCCAAGATAAAGATGCTTTATATGCTGAAAGATTGGTTGCTTTT 114454 Query 101927 GCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAAC 101986 ||||| ||||||| || |||||||||||| |||| || || || || ||| | || || Sbjct 114455 GCTGCTATTGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTTTGGTTAAAAAAG 114514 Query 101987 AGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTT 102046 || ||| | |||| ||| | || | ||||||||| || |||| ||| || |||||| | Sbjct 114515 AGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAATTAATTTGTAGAGATGAAGGTTTA 114574 Query 102047 CATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAA 102106 ||| || ||||| || | | || | ||| ||| ||||| |||| Sbjct 114575 CATACTGATTTTGCTTGTTTATTATTCTCCCA---TTTACAAAATAGACCATCTCCAGAA 114631 Query 102107 AGGATTCTTGAAATTGTCA---CTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTT 102163 ||| |||||| ||| |||||| || ||||||| |||||| | | || | | Sbjct 114632 ---ATTGTTGAAAAAATCATTGTTGAAGCTGTTGAAATTGAAAAAGAATATTTTACTGAT 114688 Query 102164 TCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTT 102223 | || || ||| ||| | || ||||| | || || ||| | || || |||||| | Sbjct 114689 GCTCTTCCAGTTTCTTTATTAGGTATGAATTCTAATTTAATGTGTCAATATGTTGAATAT 114748 Query 102224 GTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGTTACCAACCC 102282 || || |||| | |||| ||| |||| | || |||| |||||||||||||| || Sbjct 114749 GTTGCTGATAGATTATTATTTGCTTTGGGTAATAAGAAAG-TTTATAATGTTACCAATCC 114807 Query 102283 CTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGT 102342 || |||||||| ||||| ||| | | ||| || |||||||| ||||||||||| Sbjct 114808 ATTTGATTTCATGGAAAATATCTCCTTGGCCGGTAAAACTAACTTTTTCGAAAAGAGAGT 114867 Query 102343 CGCCGAGTATCAA 102355 | || |||||| Sbjct 114868 TTCTGATTATCAA 114880 >seq442 Length=162164 Score = 138 bits (152), Expect = 2e-27 Identities = 324/476 (68%), Gaps = 15/476 (3%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGG---ACCCCAAATGAGGTTCTCTCT- 35208 ||| | ||||| ||||| ||| ||| |||||| ||| ||| | || || | | Sbjct 130296 GATCGTACTGGTACAGGTACTAAATCACTTTTTGCCCCACCTCAACTAAGATTTGATTTA 130237 Query 35209 TCGAGACGACACTATTCCAGTTCTC-ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGG 35267 |||| | ||||| ||||| || | |||||||||||| | |||| | ||| || | Sbjct 130236 TCGA-ATGACAC-ATTCCCTTTGTTGACTACCAAGAAAGTATTCTCCAAAGGTATTATTC 130179 Query 35268 AAGAACTCTCGTGGTTCAT--CAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAA 35325 | ||| | | ||||| || | || ||| | || || ||| ||| |||| ||| Sbjct 130178 ATGAATTATTATGGTTTATTGCTGGATCAA--CCGATGCTAAAATATTAACCAACAAGGG 130121 Query 35326 GATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGA 35385 | | || ||| | | |||||| || || |||| ||| |||| || ||| | Sbjct 130120 AGTCAAAATATGGGAAGGTAATGGATCCCGTGAATATTTAGACAAATTGGGATTAACTCA 130061 Query 35386 TAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGA 35445 | || || ||||||||||| ||||| |||||||||||| | |||||||||||||| Sbjct 130060 CCGTCGTGAAGGTGATTTGGGACCAGTATATGGATTCCAATGGAGACATTTTGGTGCTGA 130001 Query 35446 ATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACT 35505 |||| | | ||| | | ||||||||||| | ||| ||||||||| ||||| | Sbjct 130000 ATATAAAAATTGTGATGCTGATTATACTGGGCAAGGTTATGATCAATTACAAGATATAAT 129941 Query 35506 AAAGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTA 35564 || | | | ||| || ||| |||||||||| || || |||| |||||||| ||| Sbjct 129940 TAA-AAAATTAAAGACTAACCCATATGATAGAAGAATAATCATGAGTGCATGGAACCCTC 129882 Query 35565 TGGATCTTCACCTTATGGCTCTTCCTCCATGCCA-CATGACTGCTCAATTTTATGT 35619 ||| | || |||||| | |||||||| || | ||| |||||||||||| Sbjct 129881 CAGATTTCGACAAGATGGCTTTACCTCCATGTCATGTTTTCTG-TCAATTTTATGT 129827 >seq154 Length=15437 Score = 96.9 bits (106), Expect = 7e-15 Identities = 225/334 (67%), Gaps = 8/334 (2%) Strand=Plus/Plus Query 93372 TTGGTCAACAAACATACCTCTCTGAATAGCCATGTCCA-AAGTAGTACGAGGATTAATTT 93430 ||| |||| ||| ||||||| | | |||||||| | || || | || ||| | Sbjct 11065 TTGATCAATGAACTTACCTCTATCAGCTGCCATGTCAATAATTACTTTTTGGGA-AATCT 11123 Query 93431 CCCATACAGTTTTGAATAGTTCCTTGGTCGATTTAGGGATATTAGGAAGCGTCTGAATAG 93490 |||| || |||||| ||| | ||||| | | | || |||||||||| ||||||| | Sbjct 11124 CCCAAACTGTTTTGTATAATGCCTTGATATCTGTGGGTATATTAGGAATACTCTGAATTG 11183 Query 93491 ATCCACCACTTGCCATAATCCTCT-GTTT--AGTTACTGAATTCCATTCTCCCAGTTTTA 93547 ||||| || |||| || | | |||| | | |||| ||||| |||| | | Sbjct 11184 ATCCAT---TTTCCATCATGATTTTGTTTCTAATGGCTGAGTTCCAGATACCCAAATCCA 11240 Query 93548 TGAGCTCTCTAATCACATATTCGTTCACCACTTGGAATGATCCTGAAAGTACATTACGAT 93607 | | ||| | || | ||||| || ||||| ||| | ||| || | ||| |||| | Sbjct 11241 TCAAATCTTTTATTAGATATTTATTAACCACCTGGTACTCTCCAGATAATACTCTACGGT 11300 Query 93608 TATACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGG 93667 | |||| ||| || || | || ||||| ||||| || ||||| |||| || | Sbjct 11301 TGTACAAGTTTGAAGTATATGGTTCAAAACATTCATTAAATCCAAGGATTTGTGAGGTTG 11360 Query 93668 ATGCAGTAGGCATGGGAGCAACAAACATTGAATT 93701 | ||||||||||| || ||||| | || |||||| Sbjct 11361 AAGCAGTAGGCATTGGTGCAACTACCAATGAATT 11394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577521008005