Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq510 443 2e-119 >seq510 Length=157725 Score = 443 bits (490), Expect = 2e-119 Identities = 639/888 (72%), Gaps = 19/888 (2%) Strand=Plus/Minus Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622 ||||| ||||| || ||||||||| ||| |||||| ||||| || |||||||||||| Sbjct 114900 TTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTA 114841 Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATC 13681 || ||| || ||||||||||| |||||||||||||| | |||| | | ||||| | Sbjct 114840 CCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTA-ACATTATAAACTTTCTT 114782 Query 13682 ACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741 | ||| | | |||| |||||||||||||| | | |||| ||||||| ||||||||| Sbjct 114781 ATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAATT 114722 Query 13742 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 13801 | |||||||||||| || || |||| || || ||| |||||||||| || Sbjct 114721 AGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTTC 114662 Query 13802 CACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTT 13861 ||||| || || || || || ||| || ||| || || || || ||| Sbjct 114661 AACAGCTTCAACAATGATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAATGGGA 114602 Query 13862 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13921 || | |||||| ||||||||| ||| | || |||||||||| ||| | ||| || || Sbjct 114601 GAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGGA 114542 Query 13922 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCC 13981 || || || ||||||||||| |||| |||||||||||||| || | ||||||||| || Sbjct 114541 GAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAACC 114482 Query 13982 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14041 |||||| || || |||| |||||||| || | |||| ||| || | | || | Sbjct 114481 ACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATC 114422 Query 14042 TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14101 ||| | |||||||| | ||||| |||| |||||| ||||| | || |||| Sbjct 114421 TTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTTTC 114362 Query 14102 AATAGCATTAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14159 ||| ||||||||||| | || ||||| | | | ||| || || || ||||| | | Sbjct 114361 AATGGCATTAAATAAGAAATCAGCTTCT-TGTGGATCTT-TAACATAAGTTTCAATCAAT 114304 Query 14160 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTA 14219 || |||||||||||| || ||||||||||| || |||||||||||||| || || Sbjct 114303 AAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTA 114244 Query 14220 GCTTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACC 14278 ||||| | | ||| ||||| | || ||||| |||| | |||||||||||||||||||| Sbjct 114243 GCTTCTGGCAGTTGAACTTCAGCAGAAAAAT-TTTCAACTAAATTTTCATTAACTATACC 114185 Query 14279 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT----GT 14334 ||| || |||||||| ||||| | | |||||||||| || |||||| || Sbjct 114184 ATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTAT--CT-TTCATTATCAGT 114128 Query 14335 TGAGT--TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 | | | || |||||||| ||||| ||| | ||| ||||| ||| |||||||||| Sbjct 114127 TAATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAA 114068 Query 14393 ACTAGCGACAGCTTTTTTATACATTACCCATATTTCTT--TATATAAT 14438 ||| ||||||||||||| | ||| ||||| | ||| |||| Sbjct 114067 GGAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAAT 114020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479724935737400