Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq510 428 4e-115 >seq510 Length=157725 Score = 428 bits (474), Expect = 4e-115 Identities = 636/888 (72%), Gaps = 19/888 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 ||||| ||||| || ||||||||| ||| |||||| ||||| ||||||||||||||| Sbjct 114900 TTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTA 114841 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || ||||||||||| ||||| |||||||| || |||| | | ||||| | Sbjct 114840 CCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTA-ACATTATAAACTTTCTT 114782 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 | ||| | | ||||||||||||||||||| | | |||| ||||||| ||||||||| Sbjct 114781 ATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAATT 114722 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589 | |||||||||||| || || |||| || ||| ||| |||||||||| || Sbjct 114721 AGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTTC 114662 Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT 13649 ||||| || || || | | || ||| || ||| || || || || ||| Sbjct 114661 AACAGCTTCAACAATGATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAATGGGA 114602 Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13709 || | |||||| ||||||||| ||| | || |||||||||| ||| | ||| || || Sbjct 114601 GAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGGA 114542 Query 13710 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 13769 || || || ||||||||||| |||| |||||||||||||| || | ||| ||||| || Sbjct 114541 GAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAACC 114482 Query 13770 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTT 13829 |||||| || || |||| |||||||| || | | || ||| || | | || | Sbjct 114481 ACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATC 114422 Query 13830 TTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 13889 ||| | | |||||||| | ||||| |||| |||||| ||||| | || |||| Sbjct 114421 TTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTTTC 114362 Query 13890 GATTGCATTGAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 13947 || ||||| ||||| || ||||| | | | ||| || || || ||||| | | Sbjct 114361 AATGGCATTAAATAAGAAATCAGCTTCT-TGTGGATCTT-TAACATAAGTTTCAATCAAT 114304 Query 13948 AAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTA 14007 || |||||||||||| || |||||||| || || |||||||||||||| || || Sbjct 114303 AAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTA 114244 Query 14008 GCTTCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACC 14066 ||||||| | ||| || || | || ||||| |||| | || ||||||||||| ||||| Sbjct 114243 GCTTCTGGCAGTTGAACTTCAGCAGAAAAAT-TTTCAACTAAATTTTCATTAACTATACC 114185 Query 14067 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT----GT 14122 ||| || |||||||| ||||| | | |||||||||| || |||||| || Sbjct 114184 ATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTAT--CT-TTCATTATCAGT 114128 Query 14123 TGAGT--TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 | | | || |||||||| | ||||| ||| | ||| ||||| ||| |||||||||| Sbjct 114127 TAATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAA 114068 Query 14181 ACTAGCGACAGCTTTTTTATACATTACCCATATTTCTT--TATATAAT 14226 ||| ||||||||||||| | ||| ||||| | ||| |||| Sbjct 114067 GGAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAAT 114020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585743014040